RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SOX3P41225 446 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 MAPK12P53778 367 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 DEFB103AP81534 67 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 ZNF284Q2VY69 593 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 PLK5Q496M5 336 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 SYTL3Q4VX76 610 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 ARHGAP15Q53QZ3 475 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 XKR6Q5GH73 641 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 CTRB2Q6GPI1 263 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 ASTLQ6HA08 431 aaPredicted RBP10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 ZNF770Q6IQ21 691 aaPredicted RBP10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 ZNF730Q6ZMV8 503 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 Q6ZVU0 165 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 RTL10Q7L3V2 364 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 TMEM25Q86YD3 366 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 AQP11Q8NBQ7 271 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 OR9Q2Q8NGE9 314 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 OR4A15Q8NGL6 344 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 LRRC20Q8TCA0 184 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 VWCEQ96DN2 955 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 NELL2Q99435 816 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 KCNJ15Q99712 375 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 BEX2Q9BXY8 128 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 ABCG8Q9H221 673 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 RANBP3Q9H6Z4 567 aaPredicted RBP10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 PPP1R3EQ9H7J1 279 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 HSPB11Q9Y547 144 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 RNF215Q9Y6U7 377 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 DENND4CQ5VZ89 1909 aa10.17□□□□□ -0.78
MTHFD1-210ENST00000555252 NEDD8-MDP1E9PL57 170 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 CDK2AP1O14519 115 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SGTAO43765 313 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 PRAMEF4O60810 478 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ATG13O75143 517 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ENTPD6O75354 484 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 CXCL14O95715 111 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 PDGFAP04085 211 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 NUDT7P0C024 238 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 MSL3P1P0C860 447 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 LAMP1P11279 417 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 GJA1P17302 382 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 HK1P19367 917 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 UQCRC1P31930 480 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 RPL3P39023 403 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 WDR5P61964 334 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 HOXC5Q00444 222 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ACSM2AQ08AH3 577 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SCARB2Q14108 478 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 DUSP6Q16828 381 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 WSCD2Q2TBF2 565 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 HENMT1Q5T8I9 393 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 PRAMEF9Q5VWM5 478 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ACSM2BQ68CK6 577 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 TRIM40Q6P9F5 258 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SERPINA13PQ6UXR4 307 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 DPPA4Q7L190 304 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 HSD11B1LQ7Z5J1 315 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 KIAA0907Q7Z7F0 614 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 GLRX5Q86SX6 157 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 NRSN1Q8IZ57 195 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 NAGSQ8N159 534 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 C9orf62Q8N4C0 152 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 FBXL6Q8N531 539 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 TMEM159Q96B96 161 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SH3KBP1Q96B97 665 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 TRMT61AQ96FX7 289 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 FOPNLQ96NB1 174 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 QRFPRQ96P65 431 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 AIFM2Q9BRQ8 373 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ATG10Q9H0Y0 220 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 NARFLQ9H6Q4 476 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 NMNAT1Q9HAN9 279 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 CD84Q9UIB8 345 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ING4Q9UNL4 249 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 LINC00854A0A1B0GVQ3 168 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 WASHC1A8K0Z3 465 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SLC30A4O14863 429 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SLC22A5O76082 557 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 RAB36O95755 333 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 C1QCP02747 245 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 CSF2P04141 144 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 CCL5P13501 91 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 XPAP23025 273 aaPredicted RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 MVDP53602 400 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 EPHA5P54756 1037 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ABATP80404 500 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ALDH6A1Q02252 535 aaKnown RBP10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ZNF91Q05481 1191 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 TPBGQ13641 420 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 COL28A1Q2UY09 1125 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 HSD17B12Q53GQ0 312 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 SPIN4Q56A73 249 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 FAAH2Q6GMR7 532 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 MZT2AQ6P582 158 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 AGTRAPQ6RW13 159 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 CASP12Q6UXS9 341 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 ADIPOR2Q86V24 386 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 TAGAPQ8N103 731 aa10.16□□□□□ -0.78
MTHFD1-210ENST00000555252 Q8N402 240 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms