RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ANKRD66B4E2M5 251 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 E9PI62 339 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 CHEK1O14757 476 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 ZNF208O43345 1280 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 EXTL3O43909 919 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 TM7SF2O76062 418 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 GOT2P00505 430 aaKnown RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 PATE4P0C8F1 98 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 POLR2MP0CAP2 368 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 KRT3P12035 628 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 EZRP15311 586 aaKnown RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 CSF2RAP15509 400 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 POLR2CP19387 275 aaPredicted RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 SFTPDP35247 375 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 DCTP40126 519 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 THOP1P52888 689 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 GEMP55040 296 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 SELPLGQ14242 412 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 SPHARQ15513 63 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 DPYSL2Q16555 572 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 PHKG1Q16816 387 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 ITPRIPL2Q3MIP1 535 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 POM121L1PQ3SYA9 428 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 TMEM35AQ53FP2 167 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 PHYHD1Q5SRE7 291 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 TAF3Q5VWG9 929 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 NIPAL3Q6P499 406 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 TRIM65Q6PJ69 517 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 BLOC1S2Q6QNY1 142 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 CPEB2Q7Z5Q1 589 aaKnown RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 SLC43A2Q8N370 569 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 DCLK2Q8N568 766 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 PNPT1Q8TCS8 783 aaKnown RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 GIPC3Q8TF64 312 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 PEX13Q92968 403 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 TMEM45BQ96B21 275 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 RBM14Q96PK6 669 aaKnown RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 MAP3K3Q99759 626 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 TRAF4Q9BUZ4 470 aaPredicted RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 MAGT1Q9H0U3 335 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 MARCH7Q9H992 704 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.66□□□□□ -1.66
VRK1-203ENST00000555067 P2RX2Q9UBL9 471 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 NCKAP1Q9Y2A7 1128 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 MROH5Q6ZUA9 1318 aa4.66□□□□□ -1.66
VRK1-203ENST00000555067 PARD3Q8TEW0 1356 aa4.65□□□□□ -1.66
VRK1-203ENST00000555067 A0A0U1RQS6 177 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 MBLAC1A4D2B0 266 aaPredicted RBP4.65□□□□□ -1.67
VRK1-203ENST00000555067 KLF11O14901 512 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 SYNGR3O43761 229 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 ECE2O60344 883 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 SDC3O75056 442 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 CTAG2O75638 210 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 SERPINF2P08697 491 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 FAM106CPP0CH98 169 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 CD59P13987 128 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 CKMT2P17540 419 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 NCF2P19878 526 aaPredicted RBP4.65□□□□□ -1.67
VRK1-203ENST00000555067 CDH3P22223 829 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 CCT6AP40227 531 aaKnown RBP4.65□□□□□ -1.67
VRK1-203ENST00000555067 ACADVLP49748 655 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 PDX1P52945 283 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 MAZP56270 477 aaKnown RBP4.65□□□□□ -1.67
VRK1-203ENST00000555067 KLC1Q07866 573 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 TAF10Q12962 218 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 SRSF5Q13243 272 aaKnown RBP4.65□□□□□ -1.67
VRK1-203ENST00000555067 ARHGAP19Q14CB8 494 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 ODF4Q2M2E3 257 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 ZNF528Q3MIS6 628 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 BCL7AQ4VC05 210 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 NDUFAF5Q5TEU4 345 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 LIPJQ5W064 366 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 HIST2H2AA3Q6FI13 130 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 SLC39A4Q6P5W5 647 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 C5orf24Q7Z6I8 188 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 FAM228AQ86W67 206 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 EGFL6Q8IUX8 553 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 UBQLNLQ8IYU4 475 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 PDCL2Q8N4E4 241 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 OR52J3Q8NH60 311 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 MIPOL1Q8TD10 442 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 RASD2Q96D21 266 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 USP28Q96RU2 1077 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 TESK2Q96S53 571 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 FUNDC2Q9BWH2 189 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 PKIBQ9C010 78 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 FAM192AQ9GZU8 254 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 RNF121Q9H920 327 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 FANCEQ9HB96 536 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 CRLS1Q9UJA2 301 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 B9D1Q9UPM9 204 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 RNF115Q9Y4L5 304 aa4.65□□□□□ -1.67
VRK1-203ENST00000555067 A0A1W2PRB8 838 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 OR52A4PA6NMU1 304 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 SMIM1B2RUZ4 78 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 M0QX08 132 aa4.64□□□□□ -1.67
VRK1-203ENST00000555067 CASC3O15234 703 aaKnown RBP4.64□□□□□ -1.67
VRK1-203ENST00000555067 BUD23O43709 281 aaKnown RBP4.64□□□□□ -1.67
VRK1-203ENST00000555067 PRKNO60260 465 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms