RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CHTF18Q8WVB6 975 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 COQ8BQ96D53 544 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 CCDC74BQ96LY2 380 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 BCL7BQ9BQE9 202 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 ADNPQ9H2P0 1102 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 EHD1Q9H4M9 534 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 GPN2Q9H9Y4 310 aaPredicted RBP16.45■□□□□ 0.22
SHOX-204ENST00000554971 SEMA5BQ9P283 1151 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 NAALAD2Q9Y3Q0 740 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 PCDHGB1Q9Y5G3 927 aa16.45■□□□□ 0.22
SHOX-204ENST00000554971 A8MU76 341 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 FOXE1O00358 373 aaPredicted RBP16.44■□□□□ 0.22
SHOX-204ENST00000554971 SCAMP2O15127 329 aaKnown RBP16.44■□□□□ 0.22
SHOX-204ENST00000554971 HYAL3O43820 417 aaPredicted RBP16.44■□□□□ 0.22
SHOX-204ENST00000554971 PRAMEF10O60809 474 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 CSO75390 466 aaKnown RBP16.44■□□□□ 0.22
SHOX-204ENST00000554971 CD22P20273 847 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 FPR1P21462 350 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 HPCAL1P37235 193 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 TBPL1P62380 186 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 ELOAQ14241 798 aaKnown RBP16.44■□□□□ 0.22
SHOX-204ENST00000554971 KIR2DS3Q14952 304 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 C16orf72Q14CZ0 275 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 CPTPQ5TA50 214 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 ZNF621Q6ZSS3 439 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 TMPRSS12Q86WS5 348 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 THAP11Q96EK4 314 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 ZDHHC12Q96GR4 267 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 DUSP26Q9BV47 211 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 ACAT2Q9BWD1 397 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 TMEFF2Q9UIK5 374 aaPredicted RBP16.44■□□□□ 0.22
SHOX-204ENST00000554971 ACACBO00763 2458 aa16.44■□□□□ 0.22
SHOX-204ENST00000554971 DSPP15924 2871 aaKnown RBP16.43■□□□□ 0.22
SHOX-204ENST00000554971 A0A1B0GVG6 124 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 PMS2P1A4D2B8 440 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 C2orf74A8MZ97 194 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 E7EQ34 232 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 AGRPO00253 132 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 LRATO95237 230 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 FKBP9O95302 570 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 FABP3P05413 133 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 PVRP15151 417 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 CCKBRP32239 447 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 IST1P53990 364 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 CD47Q08722 323 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 TARDBPQ13148 414 aaKnown RBP eCLIP16.43■□□□□ 0.22
SHOX-204ENST00000554971 CAPN13Q6MZZ7 669 aaPredicted RBP16.43■□□□□ 0.22
SHOX-204ENST00000554971 SPARTQ8N0X7 666 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 OR7A2PQ8NGA2 310 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 EFCAB11Q9BUY7 163 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 SGPP1Q9BX95 441 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 LIN28AQ9H9Z2 209 aaKnown RBP16.43■□□□□ 0.22
SHOX-204ENST00000554971 SH2B3Q9UQQ2 575 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 TSC22D4Q9Y3Q8 395 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 SNX5Q9Y5X3 404 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 IGKV1-8A0A0C4DH67 115 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 TLCD2A6NGC4 264 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 ISM1B1AKI9 464 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 RNASET2O00584 256 aaKnown RBP16.43■□□□□ 0.22
SHOX-204ENST00000554971 ST6GAL1P15907 406 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 ITIH1P19827 911 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 CCNA2P20248 432 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 HSD17B2P37059 387 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 EMP3P54852 163 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 NEDD8Q15843 81 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 PAGE2BQ5JRK9 111 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 PHF19Q5T6S3 580 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 XAF1Q6GPH4 301 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 MED27Q6P2C8 311 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 PRSS42Q7Z5A4 293 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 SMPDL3AQ92484 453 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 OR4K3Q96R72 315 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 DPYSL5Q9BPU6 564 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 KLHL25Q9H0H3 589 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 TPT1P8Q9HAU6 139 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 FANCEQ9HB96 536 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 ZNF282Q9UDV7 671 aaPredicted RBP16.43■□□□□ 0.22
SHOX-204ENST00000554971 ATP6V1HQ9UI12 483 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 KLHL20Q9Y2M5 609 aa16.43■□□□□ 0.22
SHOX-204ENST00000554971 ATE1O95260 518 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 ANKRD34CP0C6C1 535 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 SPINK2P20155 84 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 IGFBP5P24593 272 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 LAPTM5Q13571 262 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 ZIC1Q15915 447 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 KIAA1614Q5VZ46 1190 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 KDM4DQ6B0I6 523 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 GTF2IRD2BQ6EKJ0 949 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 SLCO4C1Q6ZQN7 724 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 ZNF551Q7Z340 670 aaPredicted RBP16.42■□□□□ 0.22
SHOX-204ENST00000554971 TMEM179BQ7Z7N9 219 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 GTF2IRD2Q86UP8 949 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 CACTIN-AS1Q8N1I8 211 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 C10orf111Q8N326 155 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 RAB42Q8N4Z0 105 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 OR2L3Q8NG85 312 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 OR7G3Q8NG95 312 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 GOT1L1Q8NHS2 421 aaPredicted RBP16.42■□□□□ 0.22
SHOX-204ENST00000554971 MED8Q96G25 268 aa16.42■□□□□ 0.22
SHOX-204ENST00000554971 DEPDC7Q96QD5 511 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms