RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CASP3P42574 277 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 SPDYE7PQ495Y7 208 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 LYPD8Q6UX82 237 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 ADHFE1Q8IWW8 467 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 C11orf65Q8NCR3 313 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 OR52J3Q8NH60 311 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 AMBRA1Q9C0C7 1298 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 FBRSQ9HAH7 460 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 ZNF229Q9UJW7 825 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 SCML1Q9UN30 329 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 CENPBD1B2RD01 187 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 PGRMC2O15173 223 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 B4GALT2O60909 372 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 C9P02748 559 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 PVRP15151 417 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 MAGP20916 626 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 KCNAB2Q13303 367 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 TP53BP2Q13625 1128 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 SCARB2Q14108 478 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 TOR1AIP1Q5JTV8 583 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 NDUFAF5Q5TEU4 345 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 NRROSQ86YC3 692 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 EID3Q8N140 333 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 CNIH3Q8TBE1 160 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 DOK4Q8TEW6 326 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 SCARF2Q96GP6 870 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-212ENST00000554467 MED30Q96HR3 178 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 YIPF4Q9BSR8 244 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 RIBC2Q9H4K1 309 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 MOV10Q9HCE1 1003 aaKnown RBP11.07□□□□□ -0.64
SHMT2-212ENST00000554467 FBXO8Q9NRD0 319 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
SHMT2-212ENST00000554467 TMEM229AB2RXF0 380 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 M0QX08 132 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PDPK1O15530 556 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PRICKLE3O43900 615 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 ALX3O95076 343 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 CRYZL1O95825 349 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 FABP3P05413 133 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 GSTM2P28161 218 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 CD40LGP29965 261 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 GRK3P35626 688 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 TGFBR1P36897 503 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PRKAG1P54619 331 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 KIAA1024LP59773 190 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 HYAL2Q12891 473 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 SLAMF1Q13291 335 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 GPR18Q14330 331 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 TJAP1Q5JTD0 557 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 C10orf62Q5T681 223 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 BROXQ5VW32 411 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 C18orf63Q68DL7 685 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 LAIR2Q6ISS4 152 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PAGE2Q7Z2X7 111 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 THAP5Q7Z6K1 395 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 LYSMD2Q8IV50 215 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 TMEFF1Q8IYR6 380 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 OR6Q1Q8NGQ2 317 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 ZCCHC10Q8TBK6 192 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 NRBF2Q96F24 287 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 MBOAT4Q96T53 435 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 YTHDF1Q9BYJ9 559 aaKnown RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 IL1RAPQ9NPH3 570 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 SIRT5Q9NXA8 310 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 CRNNQ9UBG3 495 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 RAB23Q9ULC3 237 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 TESMINQ9Y4I5 508 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 ATG4BQ9Y4P1 393 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 COLEC10Q9Y6Z7 277 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 OR6C74A6NCV1 312 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 SNPHO15079 494 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 SUV39H1O43463 412 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 DYRK3O43781 588 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 TNFRSF21O75509 655 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 AKT2P31751 481 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PPP1CAP62136 330 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 GAS6Q14393 721 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 GCNT6Q5T4J0 391 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 FAAH2Q6GMR7 532 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 CBLL1Q75N03 491 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 SPERTQ8NA61 448 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 APOBEC3BQ9UH17 382 aaKnown RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 BAG5Q9UL15 447 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 SAMHD1Q9Y3Z3 626 aaKnown RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 SNX5Q9Y5X3 404 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 COL4A2P08572 1712 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PCMT1P22061 227 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 MAOBP27338 520 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 EPHA2P29317 976 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 FMO3P31513 532 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 FEN1P39748 380 aaKnown RBP11.06□□□□□ -0.64
SHMT2-212ENST00000554467 PPP2R2BQ00005 443 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 GALK2Q01415 458 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 DUSP2Q05923 314 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 HEPACAMQ14CZ8 416 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 OR2T5Q6IEZ7 315 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 ERICH5Q6P6B1 374 aa11.06□□□□□ -0.64
SHMT2-212ENST00000554467 CEACAM20Q6UY09 585 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms