RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 DDCP20711 480 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 PCGF2P35227 344 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 RAE1P78406 368 aaKnown RBP16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 PRSS53Q2L4Q9 553 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 TMPRSS11BQ86T26 416 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 SYT14Q8NB59 555 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 C11orf65Q8NCR3 313 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 ZNF740Q8NDX6 193 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 MGAT4AQ9UM21 535 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 TRBV5-4A0A0C4DH59 114 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 ARHGEF33A8MVX0 844 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 INPPL1O15357 1258 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 CHST9Q7L1S5 443 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 COMMD7Q86VX2 200 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 THOC6Q86W42 341 aaKnown RBP16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 KIF18BQ86Y91 864 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 KATNB1Q9BVA0 655 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 FAM120CQ9NX05 1096 aaKnown RBP16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 RNF186Q9NXI6 227 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 ZDHHC3Q9NYG2 299 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 YIPF1Q9Y548 306 aa16.1■□□□□ 0.17
PPP4R3A-202ENST00000554390 ISM1B1AKI9 464 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 TLR4O00206 839 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 CTSCP53634 463 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 FKBP1BP68106 108 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 C1DQ13901 141 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 IL18Q14116 193 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 NCF4Q15080 339 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 USP30Q70CQ3 517 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 HUS1BQ8NHY5 278 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 PLD4Q96BZ4 506 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 WFDC6Q9BQY6 131 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 SLC12A9Q9BXP2 914 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 KCNN2Q9H2S1 579 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 FZD3Q9NPG1 666 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 EXO1Q9UQ84 846 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 PCDHGB7Q9Y5F8 929 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 A8MVJ9 347 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 PTNP21246 168 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 SLC6A12P48065 614 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 RBM45Q8IUH3 476 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 PROKR2Q8NFJ6 384 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 OR8J2Q8NGG1 315 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 OR52P1PQ8NH57 321 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 KCTD7Q96MP8 289 aa16.09■□□□□ 0.17
PPP4R3A-202ENST00000554390 BET1O15155 118 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 GADD45GO95257 159 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 C1SP09871 688 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 OR56A5P0C7T3 313 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 PRPH2P23942 346 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 INPP1P49441 399 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 AP1S1P61966 158 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 GALEQ14376 348 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 FCN2Q15485 313 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 TEAD4Q15561 434 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 CCDC85BQ15834 202 aaPredicted RBP16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 AANATQ16613 207 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 MEDAGQ5VYS4 303 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 RETSATQ6NUM9 610 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 C16orf62Q7Z3J2 963 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 NPAS3Q8IXF0 933 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 CSGALNACT1Q8TDX6 532 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 C2orf49Q9BVC5 232 aaPredicted RBP16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 MRPL9Q9BYD2 267 aaKnown RBP16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 CFAP97Q9P2B7 532 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 ING4Q9UNL4 249 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 CDH10Q9Y6N8 788 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 SCN8AQ9UQD0 1980 aa16.08■□□□□ 0.17
PPP4R3A-202ENST00000554390 HPGDSO60760 199 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 PSIP1O75475 530 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 GLULP15104 373 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 TLE2Q04725 743 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 UBE3AQ05086 875 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF284Q2VY69 593 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 TNFAIP8L2Q6P589 184 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF730Q6ZMV8 503 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 SZRD1Q7Z422 152 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 IQCF1Q8N6M8 205 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 WDR48Q8TAF3 677 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 AP3S1Q92572 193 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 TOE1Q96GM8 510 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 SLC6A18Q96N87 628 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 SLC35A5Q9BS91 424 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 TMEM43Q9BTV4 400 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 NMNAT1Q9HAN9 279 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 ENOPH1Q9UHY7 261 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 C1orf226A1L170 272 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 SCAMP2O15127 329 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 TSPAN6O43657 245 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 RAF1P04049 648 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 ICAM2P13598 275 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 JUPP14923 745 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 SERPINA4P29622 427 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 AGFG1P52594 562 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF91Q05481 1191 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 SLC5A12Q1EHB4 618 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 BRAT1Q6PJG6 821 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 RAB8BQ92930 207 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 NEIL2Q969S2 332 aa16.08■□□□□ 0.16
PPP4R3A-202ENST00000554390 C1GALT1C1Q96EU7 318 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms