RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MOCOSQ96EN8 888 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 LINGO1Q96FE5 620 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 HMCESQ96FZ2 354 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 WDR92Q96MX6 357 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 EPYCQ99645 322 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 NTMT1Q9BV86 223 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 GTPBP2Q9BX10 602 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 DGCR6LQ9BY27 220 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TRIM8Q9BZR9 551 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 AMBRA1Q9C0C7 1298 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 OR2B2Q9GZK3 357 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 NXF2Q9GZY0 626 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 NAA50Q9GZZ1 169 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 DSN1Q9H410 356 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ATP13A3Q9H7F0 1226 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TLR8Q9NR97 1041 aaKnown RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 INIPQ9NRY2 104 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 TMEM74BQ9NUR3 256 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 IL37Q9NZH6 218 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 MARCH4Q9P2E8 410 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CRNNQ9UBG3 495 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ZNF229Q9UJW7 825 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 OSGIN1Q9UJX0 560 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 EDARQ9UNE0 448 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 CFL2Q9Y281 166 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 DHRS7Q9Y394 339 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 OARD1Q9Y530 152 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 ANGPTL3Q9Y5C1 460 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 GMPPBQ9Y5P6 360 aa5.65□□□□□ -1.5
VPS33B-203ENST00000554264 EML5Q05BV3 1969 aa5.65□□□□□ -1.51
VPS33B-203ENST00000554264 ZZEF1O43149 2961 aa5.65□□□□□ -1.51
VPS33B-203ENST00000554264 ANKRD11Q6UB99 2663 aaPredicted RBP5.65□□□□□ -1.51
VPS33B-203ENST00000554264 PABPN1LA6NDY0 278 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 EFCAB9A8MZ26 197 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 FAM25AB3EWG3 89 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 FAM25CB3EWG5 89 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 FAM25GB3EWG6 89 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 F5H5T6 163 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 K7EQS6 105 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 K7ESM1 405 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 PRRG2O14669 202 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 MUSKO15146 869 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 STX7O15400 261 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 INSIG1O15503 277 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 DFNA5O60443 496 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 FAM20BO75063 409 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CLDN11O75508 207 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 OR4F21O95013 312 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 KLF8O95600 359 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CLIC3O95833 236 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 TSPAN12O95859 305 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 MT-CO1P00395 513 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 RPLP0P05388 317 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 FABP3P05413 133 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 KRT8P05787 483 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 LPLP06858 475 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CAPN1P07384 714 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SRPRAP08240 638 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 HTR1AP08908 422 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 TFPTP0C1Z6 253 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 FTH1P19P0C7X4 201 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 G6PDP11413 515 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CD59P13987 128 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 NCK1P16333 377 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 OR1E1P30953 314 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 POLR2IP36954 125 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 OPRD1P41143 372 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 EIF2DP41214 584 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 BUD31P41223 144 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 MAPK9P45984 424 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CLK1P49759 484 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CDH4P55283 916 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CLDN8P56748 225 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 MTPNP58546 118 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 TIAL1Q01085 375 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CD69Q07108 199 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 EFEMP1Q12805 493 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 AQP6Q13520 282 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 BOP1Q14137 746 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CLCA4Q14CN2 919 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 TRIP6Q15654 476 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 NPTX1Q15818 432 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CLPPQ16740 277 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 MEP1AQ16819 746 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 IMPG1Q17R60 797 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 ZIK1Q3SY52 487 aaPredicted RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 MS4A13Q5J8X5 152 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 C1QTNF12Q5T7M4 302 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 KDM4DQ6B0I6 523 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 THOC7Q6I9Y2 204 aaKnown RBP5.64□□□□□ -1.51
VPS33B-203ENST00000554264 ERAP2Q6P179 960 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 NEK5Q6P3R8 708 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SLC2A7Q6PXP3 512 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 SLC36A4Q6YBV0 504 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 GDPGP1Q6ZNW5 385 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 Q6ZSR9 355 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 CHST9Q7L1S5 443 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 DET1Q7L5Y6 550 aa5.64□□□□□ -1.51
VPS33B-203ENST00000554264 GOLGA7Q7Z5G4 137 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms