RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ARHGAP22Q7Z5H3 698 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 TRIM73Q86UV7 250 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 EGFL6Q8IUX8 553 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PLD3Q8IV08 490 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 NAXDQ8IW45 347 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 D2HGDHQ8N465 521 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CSNK1A1LQ8N752 337 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 FAM169BQ8N8A8 192 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PRSS33Q8NF86 280 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ADAMTS18Q8TE60 1221 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 UTP15Q8TED0 518 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 C16orf78Q8WTQ4 265 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 DIO2Q92813 273 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 TM4SF18Q96CE8 201 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 KLHL29Q96CT2 875 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SPDL1Q96EA4 605 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 MVB12AQ96EY5 273 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 C11orf24Q96F05 449 aaPredicted RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SMIM10Q96HG1 83 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ITCHQ96J02 903 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SLC41A2Q96JW4 573 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 FCRL4Q96PJ5 515 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 HBEGFQ99075 208 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 NRTNQ99748 197 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 BTBD10Q9BSF8 475 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 NDC1Q9BTX1 674 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 EDEM2Q9BV94 578 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 STRADBQ9C0K7 418 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SPNS1Q9H2V7 528 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF768Q9H5H4 540 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF385DQ9H6B1 395 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 REEP4Q9H6H4 257 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 LYRM4Q9HD34 91 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 MYNNQ9NPC7 610 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 MIEF1Q9NQG6 463 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 FSCN3Q9NQT6 498 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 GIMAP4Q9NUV9 329 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ARL8BQ9NVJ2 186 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SH3BP4Q9P0V3 963 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ARMCX1Q9P291 453 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 BCAP29Q9UHQ4 241 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 BAIAP2L1Q9UHR4 511 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 ATP6V1HQ9UI12 483 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PHF11Q9UIL8 331 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CROTQ9UKG9 612 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CLCA2Q9UQC9 943 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 MRPS33Q9Y291 106 aaKnown RBP4.74□□□□□ -1.65
VTI1B-202ENST00000553619 KLHL20Q9Y2M5 609 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PCDHGA1Q9Y5H4 931 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 PTGDR2Q9Y5Y4 395 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 CDH23Q9H251 3354 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 RP1P56715 2156 aa4.74□□□□□ -1.65
VTI1B-202ENST00000553619 SCN3AQ9NY46 2000 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 ASXL3Q9C0F0 2248 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 LOC105369274A0A096LPK9 316 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 C15orf38-AP3S2A0A0A6YYH1 394 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 IGHV5-51A0A0C4DH38 117 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 LY6G6EA0A0G2JKS1 128 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 LOC102723532A0A0G2JNH3 316 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 IGHV5-10-1A0A0J9YXX1 117 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 PRSS51A0A1B0GVH4 220 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 A0A1W2PQM1 296 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 HYKKA2RU49 373 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 CFAP73A6NFT4 308 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 C4orf47A7E2U8 309 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 GABRR3A8MPY1 467 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 EVPLLA8MZ36 301 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 TMEM150CB9EJG8 249 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 PROB1E7EW31 1015 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 H0YIG0 161 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 SAP18O00422 153 aaKnown RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 PLPP1O14494 284 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 MRASO14807 208 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 AIM2O14862 343 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 SH3BP5O60239 455 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 ERN1O75460 977 aaKnown RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 EEDO75530 441 aaKnown RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 DNAJC8O75937 253 aaPredicted RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 OR2B3O76000 313 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 SOX30O94993 753 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 SCELO95171 688 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 BMP10O95393 424 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 NSA2O95478 260 aaKnown RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 ETHE1O95571 254 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 ANP32DO95626 131 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 FAM58BPP0C7Q3 252 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF888P0CJ79 500 aaPredicted RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 T-ENOLP0DO92 83 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 CD59P13987 128 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 SDC1P18827 310 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 DDCP20711 480 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 CPN2P22792 545 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 PPIBP23284 216 aaKnown RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 ATP5A1P25705 553 aaKnown RBP4.73□□□□□ -1.65
VTI1B-202ENST00000553619 PPP2R1BP30154 601 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 HOXC12P31275 282 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 MPIP34949 423 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 ECI1P42126 302 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 LSSP48449 732 aa4.73□□□□□ -1.65
VTI1B-202ENST00000553619 HNRNPFP52597 415 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms