RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RPS6KA2Q15349 733 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 BEX5Q5H9J7 111 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 ANKRD34AQ69YU3 496 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 CASC4Q6P4E1 433 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 TRIM40Q6P9F5 258 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 VWA1Q6PCB0 445 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 ENPP6Q6UWR7 440 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 SLC29A4Q7RTT9 530 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 MILR1Q7Z6M3 343 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 THOC6Q86W42 341 aaKnown RBP12.53□□□□□ -0.4
PRPF39-204ENST00000553605 GRAMD2AQ8IUY3 354 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 UBL4BQ8N7F7 174 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 CNEP1R1Q8N9A8 125 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 C7orf57Q8NEG2 295 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 TTLQ8NG68 377 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 OR2L5Q8NG80 312 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 SPPL2AQ8TCT8 520 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 PGM2Q96G03 612 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 DGAT2Q96PD7 388 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 KRT12Q99456 494 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 G6PC3Q9BUM1 346 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 REXO4Q9GZR2 422 aaKnown RBP12.53□□□□□ -0.4
PRPF39-204ENST00000553605 OPN3Q9H1Y3 402 aaPredicted RBP12.53□□□□□ -0.4
PRPF39-204ENST00000553605 SLCO5A1Q9H2Y9 848 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 COPS7BQ9H9Q2 264 aaPredicted RBP12.53□□□□□ -0.4
PRPF39-204ENST00000553605 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRPF39-204ENST00000553605 TMEM160Q9NX00 188 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 TEX10Q9NXF1 929 aaPredicted RBP12.53□□□□□ -0.4
PRPF39-204ENST00000553605 LPAR3Q9UBY5 353 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 KCNE2Q9Y6J6 123 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 IQANK1A0A1B0GTG1 560 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 CAPN14A8MX76 684 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 OVOL3O00110 214 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 GNB5O14775 395 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 KLF4O43474 513 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 H2AFYO75367 372 aaKnown RBP12.52□□□□□ -0.41
PRPF39-204ENST00000553605 HAUS5O94927 633 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 TGM6O95932 706 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 CRHP06850 196 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 PTPN6P29350 595 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 STT3AP46977 705 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 FBXW4P57775 412 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 BASP1P80723 227 aaKnown RBP12.52□□□□□ -0.41
PRPF39-204ENST00000553605 SNX1Q13596 522 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.41
PRPF39-204ENST00000553605 SPA17Q15506 151 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 TIGD3Q6B0B8 471 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 ABHD17CQ6PCB6 329 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 PAQR3Q6TCH7 311 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 TMIGD1Q6UXZ0 262 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 TMEM64Q6YI46 380 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 TAGAPQ8N103 731 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 CAVIN3Q969G5 261 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 PPWD1Q96BP3 646 aaKnown RBP12.52□□□□□ -0.41
PRPF39-204ENST00000553605 LINGO1Q96FE5 620 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 RBM18Q96H35 190 aaKnown RBP12.52□□□□□ -0.41
PRPF39-204ENST00000553605 TMEM41AQ96HV5 264 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 FBXL20Q96IG2 436 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 GBP4Q96PP9 640 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 FRMD8P1Q9BZ68 369 aaPredicted RBP12.52□□□□□ -0.41
PRPF39-204ENST00000553605 WWTR1Q9GZV5 400 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 SLC22A14Q9Y267 594 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 MEGF8Q7Z7M0 2845 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 MED12Q93074 2177 aa12.52□□□□□ -0.41
PRPF39-204ENST00000553605 FRG2CA6NGY1 282 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 ADAM11O75078 769 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 HPDP32754 393 aaPredicted RBP12.51□□□□□ -0.41
PRPF39-204ENST00000553605 CASP3P42574 277 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 SLC1A2P43004 574 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 TIAL1Q01085 375 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRPF39-204ENST00000553605 GPS1Q13098 491 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 ADPRMQ3LIE5 342 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 DGAT2L6Q6ZPD8 337 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 CNGA4Q8IV77 575 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 TRIM42Q8IWZ5 723 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 OR4N5Q8IXE1 308 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 OR1J4Q8NGS1 313 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 DOK4Q8TEW6 326 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 C1orf54Q8WWF1 131 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 AKAP1Q92667 903 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRPF39-204ENST00000553605 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
PRPF39-204ENST00000553605 CTHRC1Q96CG8 243 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 SHARPINQ9H0F6 387 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 LYRM4Q9HD34 91 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 WWOXQ9NZC7 414 aa12.51□□□□□ -0.41
PRPF39-204ENST00000553605 PACSIN2Q9UNF0 486 aaPredicted RBP12.51□□□□□ -0.41
PRPF39-204ENST00000553605 ANKDD1BA6NHY2 528 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 PLOD2O00469 737 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 CLEC3AO75596 197 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
PRPF39-204ENST00000553605 THBDP07204 575 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 C1GALT1C1LP0DN25 315 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 TBXA2RP21731 343 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 GSTM2P28161 218 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 STARP49675 285 aa12.5□□□□□ -0.41
PRPF39-204ENST00000553605 RPP38P78345 283 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms