RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PCYT1BQ9Y5K3 369 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-205ENST00000553474 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
SHMT2-205ENST00000553474 OR1F1O43749 312 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 PCDH8O95206 1070 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 KAT7O95251 611 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GASTP01350 101 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 H1F0P07305 194 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 CDH3P22223 829 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 NTSP30990 170 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 AHRP35869 848 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SLC15A1P46059 708 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 RGS6P49758 472 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LIMK1P53667 647 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 UGT2B15P54855 530 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LIM2P55344 173 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 ATP1A4Q13733 1029 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 EGFLAMQ63HQ2 1017 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 PLAG1Q6DJT9 500 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 TCTN3Q6NUS6 607 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 KIAA1211LQ6NV74 962 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 TNFAIP8L2Q6P589 184 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 C19orf48Q6RUI8 117 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 CD300LDQ6UXZ3 194 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 Q6ZPB1 254 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 PTCHD4Q6ZW05 846 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GJD3Q8N144 294 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 B3GNT7Q8NFL0 401 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 BBS10Q8TAM1 723 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 CREB3L4Q8TEY5 395 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SORBS1Q9BX66 1292 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LGR4Q9BXB1 951 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SEMA3GQ9NS98 782 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 MS4A12Q9NXJ0 267 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GPR83Q9NYM4 423 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SEC14L3Q9UDX4 400 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 MKLN1Q9UL63 735 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 PRKAB1Q9Y478 270 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GPC6Q9Y625 555 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 COL6A3P12111 3177 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 A0A1W2PRQ8 180 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LRIT2A6NDA9 550 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 METTL15A6NJ78 407 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 FFAR1O14842 300 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 CASC3O15234 703 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 TMPRSS11DO60235 418 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 APODP05090 189 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 BMP4P12644 408 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 IL9P15248 144 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 FCARP24071 287 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 ELAVL4P26378 380 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 PKLRP30613 574 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GJA4P35212 333 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SSR2P43308 183 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 KHKP50053 298 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 CRISP3P54108 245 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 TAS2R38P59533 333 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LSM3P62310 102 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 RPS21P63220 83 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 CYP4F2P78329 520 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 RHAGQ02094 409 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF45Q02386 682 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 HSPB3Q12988 150 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GANABQ14697 944 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SLC9A5Q14940 896 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SYT16Q17RD7 645 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LEXMQ3ZCV2 418 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SLC25A30Q5SVS4 291 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SLX4IPQ5VYV7 408 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GDPGP1Q6ZNW5 385 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 ZBTB46Q86UZ6 589 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 C2orf73Q8N5S3 287 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LMNTD1Q8N9Z9 388 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GPR32P1Q8NGA4 272 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 OR8J1Q8NGP2 316 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 OR2A1Q8NGT9 310 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 GTPBP3Q969Y2 492 aaKnown RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SLC35G5Q96KT7 338 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 CAMK1GQ96NX5 476 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 FERD3LQ96RJ6 166 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 TREX2Q9BQ50 279 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-205ENST00000553474 C1QTNF7Q9BXJ2 289 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SIAEQ9HAT2 523 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SLC35C2Q9NQQ7 365 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 SLC9A8Q9Y2E8 581 aa12.23□□□□□ -0.45
SHMT2-205ENST00000553474 PRR19A6NJB7 356 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 RTCAO00442 366 aaKnown RBP12.22□□□□□ -0.45
SHMT2-205ENST00000553474 AXIN1O15169 862 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 FUCA1P04066 466 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 STSP08842 583 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 RELAQ04206 551 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 NCF4Q15080 339 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 ZIC1Q15915 447 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF181Q2M3W8 571 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 ARMCX4Q5H9R4 360 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 NDUFAF5Q5TEU4 345 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-205ENST00000553474 UBE3DQ7Z6J8 389 aa12.22□□□□□ -0.45
SHMT2-205ENST00000553474 MMP21Q8N119 569 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms