RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 DUSP2Q05923 314 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 C2orf80Q0P641 193 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 ZNF267Q14586 743 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-226ENST00000553011 PRSS53Q2L4Q9 553 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 RFTN2Q52LD8 501 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-226ENST00000553011 FAM71E1Q6IPT2 247 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
PTCH1-226ENST00000553011 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 CATSPER1Q8NEC5 780 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 C7orf57Q8NEG2 295 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 OR1N1Q8NGS0 311 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 ZNF721Q8TF20 911 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 EXOSC8Q96B26 276 aaKnown RBP13.14□□□□□ -0.31
PTCH1-226ENST00000553011 SENP5Q96HI0 755 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-226ENST00000553011 EGLN2Q96KS0 407 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 FCRL1Q96LA6 429 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 PPP1R36Q96LQ0 422 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 ZNF354BQ96LW1 612 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 PELOQ9BRX2 385 aaKnown RBP13.14□□□□□ -0.31
PTCH1-226ENST00000553011 CNPPD1Q9BV87 410 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 MANSC1Q9H8J5 431 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 MYNNQ9NPC7 610 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 TEKT2Q9UIF3 430 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 ANAPC2Q9UJX6 822 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 UTS2RQ9UKP6 389 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 EXO1Q9UQ84 846 aaKnown RBP13.14□□□□□ -0.31
PTCH1-226ENST00000553011 MYO18BQ8IUG5 2567 aa13.14□□□□□ -0.31
PTCH1-226ENST00000553011 SUV39H1O43463 412 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 PEX11AO75192 247 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 SNNO75324 88 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-226ENST00000553011 SNUPNO95149 360 aaKnown RBP13.13□□□□□ -0.31
PTCH1-226ENST00000553011 CT62P0C5K7 136 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 PORP16435 677 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-226ENST00000553011 SDC1P18827 310 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 GSTM5P46439 218 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 HK2P52789 917 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 ERVK-8P63133 956 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 ARG2P78540 354 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 HEPACAMQ14CZ8 416 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 MEP1AQ16819 746 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 SPRED3Q2MJR0 410 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 PLEKHN1Q494U1 663 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-226ENST00000553011 ATG16L1Q676U5 607 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 C16orf47Q6ZP98 133 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-226ENST00000553011 Q6ZS92 163 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 TRIM42Q8IWZ5 723 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 Q8NA96 180 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 CLHC1Q8NHS4 586 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 RAB3IL1Q8TBN0 382 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 HAS2Q92819 552 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 RIT1Q92963 219 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 PNPLA2Q96AD5 504 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 TUBGCP3Q96CW5 907 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 C19orf60Q96EN9 201 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 CNRIP1Q96F85 164 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-226ENST00000553011 FBXL20Q96IG2 436 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 PPP3R2Q96LZ3 170 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 ZNF681Q96N22 645 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 TSSK3Q96PN8 268 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 C1orf50Q9BV19 199 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 LIN28AQ9H9Z2 209 aaKnown RBP13.13□□□□□ -0.31
PTCH1-226ENST00000553011 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 THAP1Q9NVV9 213 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 BAIAP2L1Q9UHR4 511 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 PSME2Q9UL46 239 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 ERVK-19Q9WJR5 959 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 ZGRF1Q86YA3 2104 aa13.13□□□□□ -0.31
PTCH1-226ENST00000553011 DYTNA2CJ06 578 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 TMEM200CA6NKL6 621 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 GABRR3A8MPY1 467 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 DYRK3O43781 588 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 ZFAND5O76080 213 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 BCKDHAP12694 445 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 CSNK2A2P19784 350 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-226ENST00000553011 DDCP20711 480 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 NT5EP21589 574 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 GALNSP34059 522 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 CASRP41180 1078 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 MLF1P58340 268 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 PPP2R2AP63151 447 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 OCRLQ01968 901 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 LTB4RQ15722 352 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 ATP6AP1LQ52LC2 224 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 C6orf136Q5SQH8 315 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 ZNF468Q5VIY5 522 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-226ENST00000553011 FAM111BQ6SJ93 734 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 HSDL2Q6YN16 418 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 TICAM1Q8IUC6 712 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 GALNT12Q8IXK2 581 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 LGI4Q8N135 537 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 ADCY4Q8NFM4 1077 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-226ENST00000553011 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
PTCH1-226ENST00000553011 CCT7Q99832 543 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 RNF32Q9H0A6 362 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 EPN3Q9H201 632 aa13.12□□□□□ -0.31
PTCH1-226ENST00000553011 PFDN4Q9NQP4 134 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms