RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SAMD14Q8IZD0 417 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 MMP21Q8N119 569 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 BEST3Q8N1M1 668 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 AMER2Q8N7J2 671 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 ZNF781Q8N8C0 355 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 OR1N1Q8NGS0 311 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 OR8K3Q8NH51 312 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 C19orf60Q96EN9 201 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 RBM18Q96H35 190 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 ZNF764Q96H86 408 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 PPP3R2Q96LZ3 170 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 NPAS2Q99743 824 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 DEFB126Q9BYW3 111 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 OR8D2Q9GZM6 311 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 ILKAPQ9H0C8 392 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 HEY2Q9UBP5 337 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 PSME2Q9UL46 239 aa10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 POLR3HQ9Y535 204 aaPredicted RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 HELZ2Q9BYK8 2649 aaKnown RBP10.91□□□□□ -0.66
TRAFD1-209ENST00000552896 UQCRHLA0A096LP55 91 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 A0A1W2PS29 197 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 OR5H15A6NDH6 313 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 WASHC1A8K0Z3 465 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 A8MUI8 341 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 FCHO1O14526 889 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 KLF11O14901 512 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 SNNO75324 88 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 WDPCPO95876 746 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 PORP16435 677 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 SDC1P18827 310 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 TNNI3P19429 210 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 CSNK2A2P19784 350 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 DDCP20711 480 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 MAPK1P28482 360 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 RPL14P50914 215 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 MLF1P58340 268 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 ARG2P78540 354 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 ZNF169Q14929 603 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 TLR1Q15399 786 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 GALNTL6Q49A17 601 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 ATP6AP1LQ52LC2 224 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 C6orf163Q5TEZ5 329 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 ATG16L1Q676U5 607 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 FCRLBQ6BAA4 426 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 FAM71E1Q6IPT2 247 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 HSDL2Q6YN16 418 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 DGAT2L6Q6ZPD8 337 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 PRICKLE2Q7Z3G6 844 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 GALNT12Q8IXK2 581 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 LRRC25Q8N386 305 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 Q8NA96 180 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 CDC26Q8NHZ8 85 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 ZNF721Q8TF20 911 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 HAS2Q92819 552 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 RIT1Q92963 219 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 UCN3Q969E3 161 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 C20orf27Q9GZN8 174 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 EPN3Q9H201 632 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 CXorf21Q9HAI6 301 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 GIMAP4Q9NUV9 329 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 THAP1Q9NVV9 213 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 UTS2RQ9UKP6 389 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 CSAG2Q9Y5P2 127 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 UBR5O95071 2799 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 MYO18BQ8IUG5 2567 aa10.9□□□□□ -0.66
TRAFD1-209ENST00000552896 RP1L1Q8IWN7 2480 aaPredicted RBP10.9□□□□□ -0.67
TRAFD1-209ENST00000552896 SVILO95425 2214 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 TRAV17A0A0B4J275 112 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 OR6C76A6NM76 312 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 GABRR3A8MPY1 467 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 SLC28A2O43868 658 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ERAL1O75616 437 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ZFAND5O76080 213 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 TRHRP34981 398 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 TNFSF10P50591 281 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 XKP51811 444 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ERVK-8P63133 956 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 CEBPEQ15744 281 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 PDCD2Q16342 344 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 INAQ16352 499 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 SMU1Q2TAY7 513 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 RPS19BP1Q86WX3 136 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 VWA5B2Q8N398 1253 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF321PQ8N8H1 164 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 PPWD1Q96BP3 646 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 CNRIP1Q96F85 164 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 SENP5Q96HI0 755 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 C3orf30Q96M34 536 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF681Q96N22 645 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 CNPPD1Q9BV87 410 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 MFRPQ9BY79 579 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF395Q9H8N7 513 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 MIEF1Q9NQG6 463 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 RYDENQ9NUL5 291 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ZNF446Q9NWS9 450 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 STMN3Q9NZ72 180 aa10.89□□□□□ -0.67
TRAFD1-209ENST00000552896 ERVK-19Q9WJR5 959 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms