RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
SNRPF-204ENST00000552085 RAB6BQ9NRW1 208 aa11.24□□□□□ -0.61
SNRPF-204ENST00000552085 COPS7AQ9UBW8 275 aa11.24□□□□□ -0.61
SNRPF-204ENST00000552085 ZFP69BQ9UJL9 534 aa11.24□□□□□ -0.61
SNRPF-204ENST00000552085 MRPS33Q9Y291 106 aaKnown RBP11.24□□□□□ -0.61
SNRPF-204ENST00000552085 SYCE3A1L190 88 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 C4orf51C9J302 202 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 TMPRSS2O15393 492 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 SNX4O95219 450 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 VENTXO95231 258 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 VAPBO95292 243 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 CGAP01215 116 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 OGNP20774 298 aaKnown RBP11.23□□□□□ -0.61
SNRPF-204ENST00000552085 CCND1P24385 295 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 NMBRP28336 390 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 KIR2DL2P43627 348 aaPredicted RBP11.23□□□□□ -0.61
SNRPF-204ENST00000552085 NPY2RP49146 381 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 CCR8P51685 355 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 RAB38P57729 211 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 RUNX2Q13950 521 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 OASLQ15646 514 aaKnown RBP11.23□□□□□ -0.61
SNRPF-204ENST00000552085 NTRK2Q16620 822 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 OR2A2Q6IF42 318 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 CYHR1Q6ZMK1 362 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 YRDCQ86U90 279 aaKnown RBP11.23□□□□□ -0.61
SNRPF-204ENST00000552085 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 C9orf40Q8IXQ3 194 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 TBC1D19Q8N5T2 526 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 OTUD6BQ8N6M0 293 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 UBL4BQ8N7F7 174 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 PRELID2Q8N945 189 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 LRRC57Q8N9N7 239 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 ZNF610Q8N9Z0 462 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 FAM47BQ8NA70 645 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 ABHD11Q8NFV4 315 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 OR4K1Q8NGD4 311 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 RILPQ96NA2 401 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 TRAF4Q9BUZ4 470 aaPredicted RBP11.23□□□□□ -0.61
SNRPF-204ENST00000552085 NTMT1Q9BV86 223 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 KIFC1Q9BW19 673 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 ALOXE3Q9BYJ1 711 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 ALG2Q9H553 416 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 MANSC1Q9H8J5 431 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 AMFRQ9UKV5 643 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 CRYL1Q9Y2S2 319 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 RNF115Q9Y4L5 304 aa11.23□□□□□ -0.61
SNRPF-204ENST00000552085 MIF4GDA9UHW6 222 aaKnown RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 FAM157AC9JC47 383 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 PLOD2O00469 737 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 HCRTR2O43614 444 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 ALX3O95076 343 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 ETHE1O95571 254 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 FTCDO95954 541 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 CD8AP01732 235 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 CD8BP10966 210 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 USF1P22415 310 aaPredicted RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 AHRP35869 848 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 SESN2P58004 480 aaPredicted RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 SIRPAP78324 504 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 BTN3A2P78410 334 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 TBX2Q13207 712 aaPredicted RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 CR1LQ2VPA4 569 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 ARMC3Q5W041 872 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 BICRALQ6AI39 1079 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 LCTLQ6UWM7 567 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 SBSNQ6UWP8 590 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 SEMA6DQ8NFY4 1073 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 KCNJ9Q92806 393 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 NEUROG1Q92886 237 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 ALKBH8Q96BT7 664 aaKnown RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 CTHRC1Q96CG8 243 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 MSI2Q96DH6 328 aaKnown RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 NPLQ9BXD5 320 aaPredicted RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 INTS10Q9NVR2 710 aaKnown RBP11.22□□□□□ -0.61
SNRPF-204ENST00000552085 BFARQ9NZS9 450 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 RNF112Q9ULX5 631 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 DLGAP4Q9Y2H0 992 aa11.22□□□□□ -0.61
SNRPF-204ENST00000552085 A0A0A6YYJ9 748 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 TCRBV7S2A1N4TA0A589 114 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 SLCO1B7G3V0H7 640 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 TP53I11O14683 189 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 CLOCKO15516 846 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 LIASO43766 372 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 CTNSO60931 367 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 IFNB1P01574 187 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 CCDC166P0CW27 439 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 NPPBP16860 134 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 PTPN6P29350 595 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 MSH2P43246 934 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 SCTRP47872 440 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 NAP1L1P55209 391 aaKnown RBP11.21□□□□□ -0.61
SNRPF-204ENST00000552085 CRADDP78560 199 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 FUT7Q11130 342 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 STX4Q12846 297 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 ZNF672Q499Z4 452 aaPredicted RBP11.21□□□□□ -0.61
SNRPF-204ENST00000552085 TOR1AIP1Q5JTV8 583 aa11.21□□□□□ -0.61
SNRPF-204ENST00000552085 TREML4Q6UXN2 200 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms