RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 GPR137BO60478 399 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 FCGR3BO75015 233 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 NDUFS7O75251 213 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 GLCEO94923 617 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 NDUFB8O95169 186 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 GAS8O95995 478 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 PLGP00747 810 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ALPPP05187 535 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 H1F0P07305 194 aaKnown RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 FGF2P09038 288 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 FAM200BP0CF97 657 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 PRKAR1AP10644 381 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ALPPL2P10696 532 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 DGKAP23743 735 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 UGT1A5P35504 534 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ETV5P41161 510 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 RASSF2P50749 326 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 PDX1P52945 283 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 CLDN20P56880 219 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 HSD17B7P56937 341 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 UBASH3AP57075 661 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 YBEYP58557 167 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 RPS18P62269 152 aaKnown RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 POLR2LP62875 67 aaKnown RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 AKAP17AQ02040 695 aaKnown RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ILF2Q12905 390 aaKnown RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 KLRB1Q12918 225 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 PPP1R8Q12972 351 aaKnown RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 PTGR1Q14914 329 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ZBTB6Q15916 424 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 DEFB109BQ30KR1 87 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 POM121L1PQ3SYA9 428 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 Q4G0T1 1027 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 CEP78Q5JTW2 689 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ELFN2Q5R3F8 820 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ATP1A1-AS1Q5TC04 95 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 FAM69BQ5VUD6 431 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 WSCD1Q658N2 575 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 GUSBP11Q6P575 273 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 KLC3Q6P597 504 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SPNS3Q6ZMD2 512 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF782Q6ZMW2 699 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ZNF367Q7RTV3 350 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SIAH3Q8IW03 269 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ZBTB8OSQ8IWT0 167 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 CNTN4Q8IWV2 1026 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SFRP1Q8N474 314 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 CCDC63Q8NA47 563 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 ACVR1CQ8NER5 493 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 OR2AK2Q8NG84 335 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 OR5M8Q8NGP6 311 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 OR14A16Q8NHC5 309 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 WDR36Q8NI36 951 aaKnown RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 TBCKQ8TEA7 893 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SCARB1Q8WTV0 552 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SLC38A5Q8WUX1 472 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SLC44A1Q8WWI5 657 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SMPDL3BQ92485 455 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SYAP1Q96A49 352 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 GFI1Q99684 422 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 CCDC94Q9BW85 323 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 TRIM7Q9C029 511 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SYTL2Q9HCH5 934 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SPHK2Q9NRA0 654 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SLC38A7Q9NVC3 462 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 FAM118AQ9NWS6 357 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 OSER1Q9NX31 292 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 CLEC4EQ9ULY5 219 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 KIF3AQ9Y496 699 aa3.51□□□□□ -1.85
LIMA1-208ENST00000551691 SPIN1Q9Y657 262 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 COL27A1Q8IZC6 1860 aaPredicted RBP3.51□□□□□ -1.85
LIMA1-208ENST00000551691 CSPG4Q6UVK1 2322 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 RPS10-NUDT3A0A1W2PQS6 291 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 WDR91A4D1P6 747 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 NEMP2A6NFY4 417 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 SLC9B1P1A6NJY1 282 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 LACTBL1A8MY62 500 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 CYB561D2O14569 222 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 SLC9A3R1O14745 358 aaPredicted RBP3.5□□□□□ -1.85
LIMA1-208ENST00000551691 KRT86O43790 486 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 SSX5O60225 188 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 PROP1O75360 226 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 MT-ATP6P00846 226 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 HEXBP07686 556 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 ABHD2P08910 425 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 LIPCP11150 499 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 MBL2P11226 248 aaPredicted RBP3.5□□□□□ -1.85
LIMA1-208ENST00000551691 IRF2P14316 349 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 VCLP18206 1134 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 PIK3R1P27986 724 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 SLC6A6P31641 620 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 ARRB1P49407 418 aaPredicted RBP3.5□□□□□ -1.85
LIMA1-208ENST00000551691 PGFP49763 221 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 SERPINH1P50454 418 aaKnown RBP3.5□□□□□ -1.85
LIMA1-208ENST00000551691 MMP15P51511 669 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 HNRNPKP61978 463 aaKnown RBP eCLIP3.5□□□□□ -1.85
LIMA1-208ENST00000551691 RPS14P62263 151 aaKnown RBP3.5□□□□□ -1.85
LIMA1-208ENST00000551691 SLC7A9P82251 487 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 LCP2Q13094 533 aa3.5□□□□□ -1.85
LIMA1-208ENST00000551691 LAMB3Q13751 1172 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms