RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MRPS2Q9Y399 296 aaKnown RBP10.86□□□□□ -0.67
RAB5C-208ENST00000551338 CACNA1IQ9P0X4 2223 aa10.86□□□□□ -0.67
RAB5C-208ENST00000551338 PCDH15Q96QU1 1955 aa10.86□□□□□ -0.67
RAB5C-208ENST00000551338 REV3LO60673 3130 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 LAMA2P24043 3122 aaKnown RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 OR5K3A6NET4 321 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 H0YGG7 62 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 H3BSA7 217 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 SLC1A7O00341 560 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 EMC8O43402 210 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 AHCYL1O43865 530 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 SLC28A2O43868 658 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 DNAJB6O75190 326 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 CPNE6O95741 557 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 FESP07332 822 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 ITGA2P17301 1181 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 CDH2P19022 906 aaPredicted RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 MATN1P21941 496 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 FUT4P22083 530 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 CPN2P22792 545 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 GSTT1P30711 240 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 FEN1P39748 380 aaKnown RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 MAGEA8P43361 318 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 CDH12P55289 794 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 ARF3P61204 181 aaPredicted RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 PPP1CAP62136 330 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 RELAQ04206 551 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 TOP3AQ13472 1001 aaPredicted RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 RUNX2Q13950 521 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 SIM2Q14190 667 aaPredicted RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 LTB4RQ15722 352 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 SYPL1Q16563 259 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 DUSP7Q16829 419 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 LEXMQ3ZCV2 418 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 TMEM107Q6UX40 140 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 OLIG3Q7RTU3 272 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 OOSP2Q86WS3 158 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 CCDC116Q8IYX3 515 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 LGI4Q8N135 537 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 DEFB119Q8N690 84 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 TTC29Q8NA56 475 aaPredicted RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 ATG16L2Q8NAA4 619 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 CAMKVQ8NCB2 501 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 OR56A1Q8NGH5 318 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 MIPOL1Q8TD10 442 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 SGCDQ92629 289 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 RSC1A1Q92681 617 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF566Q969W8 418 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 MOAP1Q96BY2 351 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 NMD3Q96D46 503 aaKnown RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 MAGED4Q96JG8 741 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 CSF3RQ99062 836 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 PSD2Q9BQI7 771 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 GABARAPL3Q9BY60 117 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 TMEM74BQ9NUR3 256 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 GIMAP4Q9NUV9 329 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 PTTG2Q9NZH5 202 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 KCMF1Q9P0J7 381 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 TRPC4Q9UBN4 977 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 GPC6Q9Y625 555 aaPredicted RBP10.85□□□□□ -0.67
RAB5C-208ENST00000551338 COMMD3-BMI1R4GMX3 469 aa10.85□□□□□ -0.67
RAB5C-208ENST00000551338 C5orf42Q9H799 3197 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 A0A1W2PPC1 479 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 CCDC160A6NGH7 325 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 METTL12A8MUP2 240 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 B4DGG1 531 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 ABCB7O75027 752 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 IFNW1P05000 195 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 FHP07954 510 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 CHRM4P08173 479 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 HTR1AP08908 422 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 ANXA8P13928 327 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 JUNBP17275 347 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-208ENST00000551338 JUNDP17535 347 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 RHCEP18577 417 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 CD27P26842 260 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 EPHA2P29317 976 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 PEX19P40855 299 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 BUD31P41223 144 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-208ENST00000551338 MC3RP41968 323 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 KCNJ5P48544 419 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 BLKP51451 505 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 RPS6KA3P51812 740 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 LIM2P55344 173 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 MAZP56270 477 aaKnown RBP10.84□□□□□ -0.67
RAB5C-208ENST00000551338 STARD6P59095 220 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 OLR1P78380 273 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 IL5RAQ01344 420 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 HHEXQ03014 270 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 KCNC4Q03721 635 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 CDK5R2Q13319 367 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 PUM1Q14671 1186 aaKnown RBP eCLIP10.84□□□□□ -0.67
RAB5C-208ENST00000551338 LASP1Q14847 261 aaKnown RBP10.84□□□□□ -0.67
RAB5C-208ENST00000551338 ZBED5Q49AG3 693 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 DEFB134Q4QY38 66 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 BROXQ5VW32 411 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
RAB5C-208ENST00000551338 KCTD8Q6ZWB6 473 aa10.84□□□□□ -0.67
RAB5C-208ENST00000551338 GPR141Q7Z602 305 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms