RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 ZBED6CLQ96FA7 236 aaPredicted RBP8.72□□□□□ -1.01
UBE2N-205ENST00000550657 TEFMQ96QE5 360 aaKnown RBP8.72□□□□□ -1.01
UBE2N-205ENST00000550657 BBS4Q96RK4 519 aa8.72□□□□□ -1.01
UBE2N-205ENST00000550657 RAD9AQ99638 391 aa8.72□□□□□ -1.01
UBE2N-205ENST00000550657 CRISPLD2Q9H0B8 497 aa8.72□□□□□ -1.01
UBE2N-205ENST00000550657 LHX9Q9NQ69 397 aa8.72□□□□□ -1.01
UBE2N-205ENST00000550657 SIRT3Q9NTG7 399 aaPredicted RBP8.72□□□□□ -1.01
UBE2N-205ENST00000550657 USP34Q70CQ2 3546 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 PRAMEF27A3QJZ7 478 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 PDZK1P1A8MUH7 402 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 C1QTNF3-AMACRE9PGA6 284 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 CCRL2O00421 344 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 GPX5O75715 221 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 NFATC1O95644 943 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 OSMP13725 252 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 AZGP1P25311 298 aaKnown RBP8.71□□□□□ -1.01
UBE2N-205ENST00000550657 SOX6P35712 828 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 UGT2B10P36537 528 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 HMGA2P52926 109 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 NKX2-5P52952 324 aaPredicted RBP8.71□□□□□ -1.01
UBE2N-205ENST00000550657 OLR1P78380 273 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 DPTQ07507 201 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 FBXO43Q4G163 708 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 C1orf53Q5VUE5 145 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 FAM46CQ5VWP2 391 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 SPATC1Q76KD6 591 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 ZNF367Q7RTV3 350 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 CCDC116Q8IYX3 515 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 OR8H2Q8N162 312 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 RGMAQ96B86 450 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 SLC35G5Q96KT7 338 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 LINC00615Q96LM1 132 aaPredicted RBP8.71□□□□□ -1.01
UBE2N-205ENST00000550657 ZNF607Q96SK3 696 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 FNDC11Q9BVV2 318 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 PRSS16Q9NQE7 514 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 SNTG1Q9NSN8 517 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 EHD3Q9NZN3 535 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 PCDHGA3Q9Y5H0 932 aa8.71□□□□□ -1.01
UBE2N-205ENST00000550657 NOTCH4Q99466 2003 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 SZT2Q5T011 3432 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 MED26O95402 600 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 CXCR2P25025 360 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 MAT2AP31153 395 aaKnown RBP8.71□□□□□ -1.02
UBE2N-205ENST00000550657 MAGEA10P43363 369 aaPredicted RBP8.71□□□□□ -1.02
UBE2N-205ENST00000550657 RAB8AP61006 207 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 MLLT1Q03111 559 aaPredicted RBP8.71□□□□□ -1.02
UBE2N-205ENST00000550657 ELOAQ14241 798 aaKnown RBP8.71□□□□□ -1.02
UBE2N-205ENST00000550657 SSX1Q16384 188 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 GPAT3Q53EU6 434 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 SPANXN2Q5MJ10 180 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 MLIPQ5VWP3 458 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 ZNF770Q6IQ21 691 aaPredicted RBP8.71□□□□□ -1.02
UBE2N-205ENST00000550657 PODNL1Q6PEZ8 512 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 UBE3DQ7Z6J8 389 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 ADGRD2Q7Z7M1 963 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 IQCHQ86VS3 1027 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 CRELD1Q96HD1 420 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 FAM210AQ96ND0 272 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 TSSK6Q9BXA6 273 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 GLIPR2Q9H4G4 154 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 NEUROD4Q9HD90 331 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 FZD3Q9NPG1 666 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 SERGEFQ9UGK8 458 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 SLC27A6Q9Y2P4 619 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 AP1M2Q9Y6Q5 423 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 PCM1Q15154 2024 aa8.71□□□□□ -1.02
UBE2N-205ENST00000550657 A0A1W2PP55 124 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 PGRMC2O15173 223 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 LRRTM2O43300 516 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 ERI3O43414 337 aaKnown RBP8.7□□□□□ -1.02
UBE2N-205ENST00000550657 SSX4O60224 188 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 SOX9P48436 509 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 PXNP49023 591 aaPredicted RBP8.7□□□□□ -1.02
UBE2N-205ENST00000550657 SEC13P55735 322 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 HOXC5Q00444 222 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 EIF4HQ15056 248 aaKnown RBP8.7□□□□□ -1.02
UBE2N-205ENST00000550657 AGAP7PQ5VUJ5 663 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 LIPKQ5VXJ0 399 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 PGBD2Q6P3X8 592 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 ZNF793Q6ZN11 406 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 ZNF765Q7L2R6 523 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 SHFQ7M4L6 423 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 DOK4Q8TEW6 326 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 ZNF354BQ96LW1 612 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 INSM2Q96T92 566 aaPredicted RBP8.7□□□□□ -1.02
UBE2N-205ENST00000550657 A4GALTQ9NPC4 353 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 P2RX2Q9UBL9 471 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 REV1Q9UBZ9 1251 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 ICKQ9UPZ9 632 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 CARD8Q9Y2G2 431 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 GPSM3Q9Y4H4 160 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 CHD9Q3L8U1 2897 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 TRBV23OR9-2A0A075B6M9 112 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 A0A1W2PPV9 198 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 LOC110117498-PIK3R3F6TDL0 507 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 SNPHO15079 494 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 ADAP00813 363 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 RPN2P04844 631 aa8.7□□□□□ -1.02
UBE2N-205ENST00000550657 HNRNPA1P09651 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE2N-205ENST00000550657 KCNJ5P48544 419 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms