RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 RPP38P78345 283 aaKnown RBP21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 SPRED3Q2MJR0 410 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 LIX1LQ8IVB5 337 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 ZZZ3Q8IYH5 903 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 LRRC25Q8N386 305 aaPredicted RBP21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 TEX9Q8N6V9 391 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 PPM1NQ8N819 430 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 GOT1L1Q8NHS2 421 aaPredicted RBP21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 ERVK-6Q9BXR3 956 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 ACTR8Q9H981 624 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 FOXD3Q9UJU5 478 aaPredicted RBP21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 ERVK-19Q9WJR5 959 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 ACOT9Q9Y305 439 aa21.24■□□□□ 0.99
SMARCD1-209ENST00000550477 C15orf38-AP3S2A0A0A6YYH1 394 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 UBXN8O00124 270 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 SYT5O00445 386 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 PROM1O43490 865 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 CTAG2O75638 210 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 GDF1P27539 372 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 STX2P32856 288 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 GALNSP34059 522 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 TMED10P49755 219 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 C18orf63Q68DL7 685 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 PM20D2Q8IYS1 436 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 ULK2Q8IYT8 1036 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 DIO2Q92813 273 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 ZNF597Q96LX8 424 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 MTERF1Q99551 399 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 SPRR3Q9UBC9 169 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 MTRF1LQ9UGC7 380 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 ARHGAP21Q5T5U3 1957 aa21.23■□□□□ 0.99
SMARCD1-209ENST00000550477 SETD2Q9BYW2 2564 aaPredicted RBP21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 C2orf92A0A1B0GVN3 265 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 ANKRD33BA6NCL7 494 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 PLPP1O14494 284 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 UGDHO60701 494 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 IL2RAP01589 272 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 DNASE1P24855 282 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 DLX5P56178 289 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 NRG3P56975 720 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 CAV1Q03135 178 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 NAB1Q13506 487 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 NTRK2Q16620 822 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 FAM83EQ2M2I3 478 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 KRTAP21-3Q3LHN1 58 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 C6orf163Q5TEZ5 329 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 OR10G3Q8NGC4 313 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 RHEBL1Q8TAI7 183 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 TP53INP1Q96A56 240 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 RMND5BQ96G75 393 aaPredicted RBP21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 ATOH8Q96SQ7 321 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 SORBS1Q9BX66 1292 aaKnown RBP21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 WWTR1Q9GZV5 400 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 CLEC4MQ9H2X3 399 aaPredicted RBP21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 DMRT3Q9NQL9 472 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 SNX15Q9NRS6 342 aa21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 UTP11Q9Y3A2 253 aaKnown RBP21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 CHCHD2Q9Y6H1 151 aaPredicted RBP21.22■□□□□ 0.99
SMARCD1-209ENST00000550477 TRAPPC6AO75865 159 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 SNX4O95219 450 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 EPPINO95925 133 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 C1QAP02745 245 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 RFPL3SP0C7P2 107 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 SLC35E2BP0CK96 405 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 NR2F6P10588 404 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 GFAPP14136 432 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 ENDOUP21128 410 aaKnown RBP21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 PIK3CGP48736 1102 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 CUL3Q13618 768 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 KBTBD12Q3ZCT8 623 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 KLC3Q6P597 504 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 LYPD8Q6UX82 237 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 PACS2Q86VP3 889 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 HSPBAP1Q96EW2 488 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 SLC6A15Q9H2J7 730 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 CCM2LQ9NUG4 571 aaPredicted RBP21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 PSD3Q9NYI0 1048 aa21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 TNPO3Q9Y5L0 923 aaKnown RBP21.21■□□□□ 0.99
SMARCD1-209ENST00000550477 AKAP9Q99996 3911 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 A0A087X1B8 175 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 H0YIV9 168 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 FAM58BPP0C7Q3 252 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 SLC35E2P0CK97 266 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 BMP5P22003 454 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 PIK3R1P27986 724 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 MASP1P48740 699 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 TRPC1P48995 793 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 ASCL1P50553 236 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 HNRNPH2P55795 449 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 SLC37A1P57057 533 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 RPS13P62277 151 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 DUSP8Q13202 625 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 EBPQ15125 230 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 FBXW10Q5XX13 1052 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 ADGRD1Q6QNK2 874 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 DGAT2L6Q6ZPD8 337 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 CMC1Q7Z7K0 106 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 NUDT13Q86X67 352 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 LACC1Q8IV20 430 aa21.2■□□□□ 0.98
SMARCD1-209ENST00000550477 FAM222BQ8WU58 562 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms