RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 C17orf105B2RV13 164 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 C9JVG2 144 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 CLPSP04118 112 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 IFNA16P05015 189 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 S1PR1P21453 382 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 GPX3P22352 226 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 GALNSP34059 522 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 MRPL19P49406 292 aaKnown RBP12.17□□□□□ -0.46
RAB5C-206ENST00000550406 ARFIP2P53365 341 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 WNT3P56703 355 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 ELAVL1Q15717 326 aaKnown RBP12.17□□□□□ -0.46
RAB5C-206ENST00000550406 LTB4RQ15722 352 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 TBR1Q16650 682 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 GSTA3Q16772 222 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 COL28A1Q2UY09 1125 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 PDCD4Q53EL6 469 aaKnown RBP12.17□□□□□ -0.46
RAB5C-206ENST00000550406 DCAF10Q5QP82 559 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 FAM111BQ6SJ93 734 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 SIMC1Q8NDZ2 872 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 PPCDCQ96CD2 204 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 RBM18Q96H35 190 aaKnown RBP12.17□□□□□ -0.46
RAB5C-206ENST00000550406 DGAT2Q96PD7 388 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 LPAR4Q99677 370 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 ELAC2Q9BQ52 826 aaKnown RBP12.17□□□□□ -0.46
RAB5C-206ENST00000550406 DPY30Q9C005 99 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 GLIPR2Q9H4G4 154 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 RABEP2Q9H5N1 569 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 CLMPQ9H6B4 373 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 CXorf21Q9HAI6 301 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 SDR39U1Q9NRG7 319 aaPredicted RBP12.17□□□□□ -0.46
RAB5C-206ENST00000550406 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 ERVK-11Q9UQG0 969 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF780BQ9Y6R6 833 aa12.17□□□□□ -0.46
RAB5C-206ENST00000550406 CFAP47Q6ZTR5 3102 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 SHOX2O60902 331 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-206ENST00000550406 SCN2BO60939 215 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 DNAJB5O75953 348 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 IGKV3-11P04433 115 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ATP1B1P05026 303 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ITGAMP11215 1152 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 COX7A2P14406 83 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 IDO1P14902 403 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 TNNI3P19429 210 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 EFNA1P20827 205 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-206ENST00000550406 HPCAL1P37235 193 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 SOX8P57073 446 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 PLIN5Q00G26 463 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 DUSP8Q13202 625 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 TERF2Q15554 542 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 SPRED3Q2MJR0 410 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 PRICKLE4Q2TBC4 344 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 LINC00303Q3SY05 128 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF628Q5EBL2 1059 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 CPTPQ5TA50 214 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 PLAG1Q6DJT9 500 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 PAOXQ6QHF9 649 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 R3HCC1LQ7Z5L2 792 aaKnown RBP12.16□□□□□ -0.46
RAB5C-206ENST00000550406 CAMKMTQ7Z624 323 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 FUNDC1Q8IVP5 155 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 APLFQ8IW19 511 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-206ENST00000550406 KIF2BQ8N4N8 673 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 TMEM102Q8N9M5 508 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-206ENST00000550406 APCDD1LQ8NCL9 501 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ADCY4Q8NFM4 1077 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 OR9I1Q8NGQ6 314 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ELP5Q8TE02 316 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF721Q8TF20 911 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 PSMF1Q92530 271 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 RIT1Q92963 219 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 NCLNQ969V3 563 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 CTHRC1Q96CG8 243 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 FER1L6-AS2Q96M78 137 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 AMDHD1Q96NU7 426 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 BBS4Q96RK4 519 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 NUDT9Q9BW91 350 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 SEMA4CQ9C0C4 833 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ING2Q9H160 280 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 MIEF1Q9NQG6 463 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 MAT2BQ9NZL9 334 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ZIM2Q9NZV7 527 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF639Q9UID6 485 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 COPG1Q9Y678 874 aaKnown RBP12.16□□□□□ -0.46
RAB5C-206ENST00000550406 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
RAB5C-206ENST00000550406 PRKNO60260 465 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 OR10H2O60403 315 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 SNX3O60493 162 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 ATP4BP51164 291 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 DGKQP52824 942 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 FUT7Q11130 342 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 MAP4K2Q12851 820 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 AIMP2Q13155 320 aaKnown RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF267Q14586 743 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 BTBD16Q32M84 506 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 PGS1Q32NB8 556 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 TRMT12Q53H54 448 aaKnown RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 SPANXN4Q5MJ08 99 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 FHL5Q5TD97 284 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 OR4F3Q6IEY1 312 aa12.15□□□□□ -0.46
RAB5C-206ENST00000550406 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-206ENST00000550406 PIGWQ7Z7B1 504 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms