RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 Q8N402 240 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 ASZ1Q8WWH4 475 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 C1GALT1C1Q96EU7 318 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 MKRN2Q9H000 416 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 OR51B5Q9H339 312 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 NIPAL2Q9H841 368 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 MCUBQ9NWR8 336 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 STMN3Q9NZ72 180 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 GULP1Q9UBP9 304 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 B4GALT6Q9UBX8 382 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 DIMT1Q9UNQ2 313 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 MGAT4BQ9UQ53 548 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 SH2B3Q9UQQ2 575 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 MEN1O00255 615 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 HOXA2O43364 376 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 GREM1O60565 184 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 PSIP1O75475 530 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 OR2B3O76000 313 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 RAB36O95755 333 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TGFB1P01137 390 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 BCHEP06276 602 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 IFNA8P32881 189 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 CD70P32970 193 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 WDR5P61964 334 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 LMAN2Q12907 356 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 RNLSQ5VYX0 342 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 LAMTOR1Q6IAA8 161 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TCTN3Q6NUS6 607 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 MED27Q6P2C8 311 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 TNFAIP8L2Q6P589 184 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 CNIH2Q6PI25 160 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 ZNF730Q6ZMV8 503 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 C19orf18Q8NEA5 215 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 C16orf78Q8WTQ4 265 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 GFM1Q96RP9 751 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 WFDC6Q9BQY6 131 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 RBFOX1Q9NWB1 397 aaKnown RBP13.04□□□□□ -0.32
HDAC7-228ENST00000548938 HSPB11Q9Y547 144 aa13.04□□□□□ -0.32
HDAC7-228ENST00000548938 PCM1Q15154 2024 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 KIAA1671Q9BY89 1806 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 A0A1W2PQ72 361 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 A0A1W2PRB8 838 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 PDE9AO76083 593 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 KLHL18O94889 574 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 SLCO2B1O94956 709 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 CYP2A6P11509 494 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-228ENST00000548938 TARDBPQ13148 414 aaKnown RBP eCLIP13.03□□□□□ -0.323e-10■■■■■ 130
HDAC7-228ENST00000548938 UAP1L1Q3KQV9 507 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 CRTC2Q53ET0 693 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-228ENST00000548938 SYT14P1Q58G82 188 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 REEP3Q6NUK4 255 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 SLCO4C1Q6ZQN7 724 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
HDAC7-228ENST00000548938 LOC105371267A0A1B0GV96 52 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 TP53P04637 393 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-228ENST00000548938 FAM157BP0CG42 384 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 OCLNQ16625 522 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 WDR45BQ5MNZ6 344 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 FAM71E1Q6IPT2 247 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 ZFP41Q8N8Y5 198 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 TMEM145Q8NBT3 493 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 OR4D11Q8NGI4 311 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 ECHDC3Q96DC8 303 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 LRR1Q96L50 414 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 SUV39H2Q9H5I1 410 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 ZDHHC6Q9H6R6 413 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 CXorf36Q9H7Y0 433 aa13.03□□□□□ -0.32
HDAC7-228ENST00000548938 FAM240BA0A1B0GVZ2 78 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 FAAHO00519 579 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 TSPAN6O43657 245 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 HCN1O60741 890 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 HPGDSO60760 199 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 HLA-DQB1P01920 261 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 H1F0P07305 194 aaKnown RBP13.02□□□□□ -0.32
HDAC7-228ENST00000548938 MEF2AQ02078 507 aaPredicted RBP13.02□□□□□ -0.32
HDAC7-228ENST00000548938 SLBPQ14493 270 aaKnown RBP eCLIP13.02□□□□□ -0.32
HDAC7-228ENST00000548938 WSCD2Q2TBF2 565 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 PLK5Q496M5 336 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 SYTL3Q4VX76 610 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 SLC8B1Q6J4K2 584 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 FAM92BQ6ZTR7 304 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 HORMAD2Q8N7B1 307 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 OR56A3Q8NH54 315 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 SLC38A5Q8WUX1 472 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 AP3S1Q92572 193 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 TTC9Q92623 222 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 VWCEQ96DN2 955 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 MAP6Q96JE9 813 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 TMEM175Q9BSA9 504 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 HDHD5Q9BXW7 423 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 PPP1R3EQ9H7J1 279 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 TRIM45Q9H8W5 580 aaPredicted RBP13.02□□□□□ -0.32
HDAC7-228ENST00000548938 GALNT9Q9HCQ5 603 aa13.02□□□□□ -0.32
HDAC7-228ENST00000548938 TESQ9UGI8 421 aaKnown RBP13.02□□□□□ -0.32
HDAC7-228ENST00000548938 SF3B6Q9Y3B4 125 aaKnown RBP13.02□□□□□ -0.32
HDAC7-228ENST00000548938 LOC102723532A0A0G2JNH3 316 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms