RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ECSITQ9BQ95 431 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 CPPED1Q9BRF8 314 aaPredicted RBP18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 SARGQ9BW04 601 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 NUDT9Q9BW91 350 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 MS4A8Q9BY19 250 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 TMEM184CQ9NVA4 438 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 GMPR2Q9P2T1 348 aaKnown RBP18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 CPNE7Q9UBL6 633 aa18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.82■□□□□ 0.6
CTDSP2-204ENST00000548823 TRBC2A0A5B9 178 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 OR5K4A6NMS3 321 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 TGFB1P01137 390 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 ZCCHC18P0CG32 403 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 F3P13726 295 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 PER3P56645 1201 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 CSNK1G2P78368 415 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 TRIP10Q15642 601 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 PLEKHN1Q494U1 663 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 OR4F3Q6IEY1 312 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 TLDC1Q6P9B6 456 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 CYP2R1Q6VVX0 501 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 R3HCC1LQ7Z5L2 792 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 CALHM3Q86XJ0 350 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 C2orf73Q8N5S3 287 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 TMEM102Q8N9M5 508 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 PAPD5Q8NDF8 572 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 TGM7Q96PF1 710 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 ACAT2Q9BWD1 397 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 REXO4Q9GZR2 422 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 AKIRIN1Q9H9L7 192 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 UCK1Q9HA47 277 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 OR6C2Q9NZP2 312 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 SCHIP1Q9P0W5 487 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 EGFL7Q9UHF1 273 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 CNOT11Q9UKZ1 510 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 FARSAQ9Y285 508 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 PCDHB14Q9Y5E9 798 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 TCRBV5S2A0A599 114 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 DHRS12A0PJE2 317 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 OR52A4PA6NMU1 304 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 FAM220BPB1ANY3 271 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 RFXANKO14593 260 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 CLEC3AO75596 197 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 LRATO95237 230 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 TIAF1O95411 115 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 IL10P22301 178 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 ARFIP1P53367 373 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 MTPNP58546 118 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 MEF2AQ02078 507 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 PDE7AQ13946 482 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 SELPLGQ14242 412 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 RBBP5Q15291 538 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 KHDRBS2Q5VWX1 349 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 FAM199XQ6PEV8 388 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 LILRA2Q8N149 483 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 VPS37AQ8NEZ2 397 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 OR7A2PQ8NGA2 310 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 ZNF570Q96NI8 536 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 QRFPRQ96P65 431 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 FCRL4Q96PJ5 515 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 SMAD5Q99717 465 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 PKP2Q99959 881 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 DUSP26Q9BV47 211 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 BHLHE41Q9C0J9 482 aaPredicted RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 OR51B5Q9H339 312 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 REEP4Q9H6H4 257 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 KAT8Q9H7Z6 458 aaKnown RBP18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 GORASP2Q9H8Y8 452 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 PDE7BQ9NP56 450 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 GPR83Q9NYM4 423 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 ADAM29Q9UKF5 820 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 LRCH1Q9Y2L9 728 aa18.81■□□□□ 0.6
CTDSP2-204ENST00000548823 GNG14A0A1W2PPG7 69 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 GABRR3A8MPY1 467 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 RNASET2O00584 256 aaKnown RBP18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 AKAP10O43572 662 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 TBX19O60806 448 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 UBXN7O94888 489 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 HOXB6P17509 224 aaKnown RBP18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 GGT1P19440 569 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 PSMA4P25789 261 aaKnown RBP18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 PSMB5P28074 263 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 OR4D2P58180 307 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 CPTPQ5TA50 214 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 FAM71E1Q6IPT2 247 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 PAGE2Q7Z2X7 111 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 PRSS42Q7Z5A4 293 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 IFNEQ86WN2 208 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 PDSS2Q86YH6 399 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 SPPL2CQ8IUH8 684 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 KBTBD2Q8IY47 623 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 NATD1Q8N6N6 113 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 ANKRD53Q8N9V6 530 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 OR2T12Q8NG77 320 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 C16orf78Q8WTQ4 265 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 CANT1Q8WVQ1 401 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 KLHL6Q8WZ60 621 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 THUMPD3Q9BV44 507 aaKnown RBP18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 TRIM8Q9BZR9 551 aa18.8■□□□□ 0.6
CTDSP2-204ENST00000548823 COPS7BQ9H9Q2 264 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms