RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 RAD23AP54725 363 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 EEF1A2Q05639 463 aaKnown RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 PRSS53Q2L4Q9 553 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 INAVAQ3KP66 663 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 OR2T5Q6IEZ7 315 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 FAM92BQ6ZTR7 304 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 CLEC4FQ8N1N0 589 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 DHRSXQ8N5I4 330 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 FAM181AQ8N9Y4 354 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 DTWD2Q8NBA8 298 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 OR2T29Q8NH02 315 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 GEMIN6Q8WXD5 167 aaKnown RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 PIGKQ92643 395 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 PMM1Q92871 262 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 NAT6Q93015 286 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 TMBIM1Q969X1 311 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 ELP4Q96EB1 424 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 MVB12AQ96EY5 273 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 CNRIP1Q96F85 164 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 TPD52L3Q96J77 140 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF681Q96N22 645 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 ACTRT3Q9BYD9 372 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 TRIM4Q9C037 500 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 RUBCNLQ9H714 662 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 FANCEQ9HB96 536 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 GPATCH2Q9NW75 528 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 IRAK4Q9NWZ3 460 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 SEMA5BQ9P283 1151 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 TRPC4Q9UBN4 977 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 SERTAD3Q9UJW9 196 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 AP4B1Q9Y6B7 739 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 A0A087WV62 115 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 FITM1A5D6W6 292 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 FAM149AA5PLN7 773 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 TMEM221A6NGB7 291 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 C4orf51C9J302 202 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 H0YAE9 185 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 M0R296 226 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 NSA2O95478 260 aaKnown RBP12.66□□□□□ -0.38
PTCH1-215ENST00000547672 CER1O95813 267 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 C9P02748 559 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 CPMP14384 443 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 ETS2P15036 469 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 CKMT2P17540 419 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 EPHA8P29322 1005 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-215ENST00000547672 ARSFP54793 590 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 PCBP3P57721 371 aaKnown RBP12.66□□□□□ -0.38
PTCH1-215ENST00000547672 SMIM11AP58511 58 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 KCNC4Q03721 635 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 DAG1Q14118 895 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 PDK3Q15120 406 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 NRF1Q16656 503 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 PEAR1Q5VY43 1037 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-215ENST00000547672 TTC23Q5W5X9 447 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 SZRD1Q7Z422 152 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 STK32CQ86UX6 486 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 CYP4Z1Q86W10 505 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 SFTPA2Q8IWL1 248 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 GPR135Q8IZ08 494 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 ABCA7Q8IZY2 2146 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 C10orf111Q8N326 155 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 NUP43Q8NFH3 380 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 OR4C6Q8NH72 309 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 PROX1Q92786 737 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 HSH2DQ96JZ2 352 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF578Q96N58 590 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-215ENST00000547672 BTBD2Q9BX70 525 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 REEP1Q9H902 201 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 BCL2L10Q9HD36 194 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 FAM60AQ9NP50 221 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 DDX18Q9NVP1 670 aaKnown RBP12.66□□□□□ -0.38
PTCH1-215ENST00000547672 SMPD3Q9NY59 655 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-215ENST00000547672 USE1Q9NZ43 259 aa12.66□□□□□ -0.38
PTCH1-215ENST00000547672 SNRNP200O75643 2136 aaKnown RBP12.65□□□□□ -0.38
PTCH1-215ENST00000547672 TTC36A6NLP5 189 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 CYR61O00622 381 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SOCS2O14508 198 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 ACOX3O15254 700 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SLC28A2O43868 658 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 CTNSO60931 367 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 PGM3O95394 542 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 ALBP02768 609 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 ATP1B1P05026 303 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 NUDT7P0C024 238 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SLC35E2P0CK97 266 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 CHN2P52757 468 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 PRKAG1P54619 331 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 MERTKQ12866 999 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 BNIP3Q12983 259 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 KRT80Q6KB66 452 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
PTCH1-215ENST00000547672 PRSS42Q7Z5A4 293 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SLC35F3Q8IY50 421 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms