RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PEX11GQ96HA9 241 aa18.29■□□□□ 0.52
SKP2-208ENST00000546211 MAGED4Q96JG8 741 aa18.29■□□□□ 0.52
SKP2-208ENST00000546211 SLC35G5Q96KT7 338 aa18.29■□□□□ 0.52
SKP2-208ENST00000546211 TMEM38AQ9H6F2 299 aa18.29■□□□□ 0.52
SKP2-208ENST00000546211 NDOR1Q9UHB4 597 aa18.29■□□□□ 0.52
SKP2-208ENST00000546211 EMC8O43402 210 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 FGF17O60258 216 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 LDB3O75112 727 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 FHP07954 510 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 ALAS2P22557 587 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 PCGF2P35227 344 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 DSTNP60981 165 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 PRR5P85299 388 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 CEACAM20Q6UY09 585 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 METTL27Q8N6F8 245 aaPredicted RBP18.28■□□□□ 0.52
SKP2-208ENST00000546211 ELP4Q96EB1 424 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 UGT2B28Q9BY64 529 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 DCAF13Q9NV06 445 aaKnown RBP18.28■□□□□ 0.52
SKP2-208ENST00000546211 FTSJ1Q9UET6 329 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 CDC14AQ9UNH5 594 aa18.28■□□□□ 0.52
SKP2-208ENST00000546211 ZNF749O43361 778 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 HNRNPRO43390 633 aaKnown RBP18.27■□□□□ 0.52
SKP2-208ENST00000546211 SERPINA1P01009 418 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 ZNF806P0C7X5 589 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 BMP2P12643 396 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 PTGER1P34995 402 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 MC3RP41968 323 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 MAGEA8P43361 318 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 ANXA11P50995 505 aaKnown RBP18.27■□□□□ 0.52
SKP2-208ENST00000546211 PRKAG1P54619 331 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 MAT1AQ00266 395 aaKnown RBP18.27■□□□□ 0.52
SKP2-208ENST00000546211 ID2Q02363 134 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 C16orf72Q14CZ0 275 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 ZNF630Q2M218 657 aaPredicted RBP18.27■□□□□ 0.52
SKP2-208ENST00000546211 FAM98BQ52LJ0 330 aaKnown RBP18.27■□□□□ 0.52
SKP2-208ENST00000546211 ZNF595Q8IYB9 648 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 EID3Q8N140 333 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 RCBTB1Q8NDN9 531 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 FBXO30Q8TB52 745 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 MAL2Q969L2 176 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 PPWD1Q96BP3 646 aaKnown RBP18.27■□□□□ 0.52
SKP2-208ENST00000546211 TBC1D20Q96BZ9 403 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 OLAHQ9NV23 265 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 THUMPD1Q9NXG2 353 aaKnown RBP18.27■□□□□ 0.52
SKP2-208ENST00000546211 V9GYQ6 96 aa18.27■□□□□ 0.52
SKP2-208ENST00000546211 CLDN4O14493 209 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 B4GALT2O60909 372 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 GP1BAP07359 652 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 ACP1P24666 158 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 KDELR2P33947 212 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 VHLP40337 213 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 GCGRP47871 477 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 SCARB2Q14108 478 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 SF3A2Q15428 464 aaKnown RBP18.26■□□□□ 0.51
SKP2-208ENST00000546211 LTB4RQ15722 352 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 LRRC23Q53EV4 343 aaPredicted RBP18.26■□□□□ 0.51
SKP2-208ENST00000546211 PHF19Q5T6S3 580 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 INTS11Q5TA45 600 aaKnown RBP18.26■□□□□ 0.51
SKP2-208ENST00000546211 TNFAIP8L2Q6P589 184 aaPredicted RBP18.26■□□□□ 0.51
SKP2-208ENST00000546211 SLC30A8Q8IWU4 369 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 SHISA5Q8N114 240 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 HORMAD2Q8N7B1 307 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 OR51Q1Q8NH59 317 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 SEPHS2Q99611 448 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 PKP2Q99959 881 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 RBCK1Q9BYM8 510 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 SAMD4AQ9UPU9 718 aaKnown RBP18.26■□□□□ 0.51
SKP2-208ENST00000546211 TTC28Q96AY4 2481 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 LAMA1P25391 3075 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 RP1P56715 2156 aa18.26■□□□□ 0.51
SKP2-208ENST00000546211 NUP214P35658 2090 aaPredicted RBP18.26■□□□□ 0.51
SKP2-208ENST00000546211 D6RAR5 112 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 NTN3O00634 580 aaPredicted RBP18.25■□□□□ 0.51
SKP2-208ENST00000546211 DSCR3O14972 297 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 SLITRK5O94991 958 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 ATP1B1P05026 303 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 ARAFP10398 606 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 MATN1P21941 496 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 RPS26P62854 115 aaKnown RBP18.25■□□□□ 0.51
SKP2-208ENST00000546211 CDK6Q00534 326 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 CHRNB3Q05901 458 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 SLC13A2Q13183 592 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 TRIP10Q15642 601 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 SYT16Q17RD7 645 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 ZC3H7AQ8IWR0 971 aaKnown RBP18.25■□□□□ 0.51
SKP2-208ENST00000546211 PAPD5Q8NDF8 572 aaKnown RBP18.25■□□□□ 0.51
SKP2-208ENST00000546211 NUP43Q8NFH3 380 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 ADCY4Q8NFM4 1077 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 NRG4Q8WWG1 115 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 KAT2AQ92830 837 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 ANKRD9Q96BM1 317 aaPredicted RBP18.25■□□□□ 0.51
SKP2-208ENST00000546211 RNF145Q96MT1 663 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 SLC7A5P2Q9GIP4 190 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 PRTFDC1Q9NRG1 225 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 DDX18Q9NVP1 670 aaKnown RBP18.25■□□□□ 0.51
SKP2-208ENST00000546211 DHCR7Q9UBM7 475 aaKnown RBP18.25■□□□□ 0.51
SKP2-208ENST00000546211 RIMS3Q9UJD0 308 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 RPS6KA6Q9UK32 745 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 SRPK3Q9UPE1 567 aa18.25■□□□□ 0.51
SKP2-208ENST00000546211 MAU2Q9Y6X3 613 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms