RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 GABRA5P31644 462 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 DGKGP49619 791 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 FABP5Q01469 135 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 PDE7AQ13946 482 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 CDONQ4KMG0 1287 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 KLHL22Q53GT1 634 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 SYT14P1Q58G82 188 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 C3orf38Q5JPI3 329 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 CCNJQ5T5M9 372 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 PRSS55Q6UWB4 352 aaPredicted RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 ZNF782Q6ZMW2 699 aaPredicted RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 C16orf78Q8WTQ4 265 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 ASZ1Q8WWH4 475 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 GATAD2BQ8WXI9 593 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 MARVELD3Q96A59 401 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 SCRN2Q96FV2 425 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 ZNF582Q96NG8 517 aaPredicted RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 DCLRE1CQ96SD1 692 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 FRMPD3Q5JV73 1810 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 SGK494L7N484 410 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 BNIP3LO60238 219 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 RFPL3O75679 317 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 APOL3O95236 402 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
SRP54-202ENST00000546080 TPBGQ13641 420 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 CCDC85BQ15834 202 aaPredicted RBP13.48□□□□□ -0.25
SRP54-202ENST00000546080 TRIM71Q2Q1W2 868 aaKnown RBP13.48□□□□□ -0.25
SRP54-202ENST00000546080 ZBTB37Q5TC79 503 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 TCTN3Q6NUS6 607 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 ANKRD54Q6NXT1 300 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.48□□□□□ -0.252e-7■□□□□ 11.3
SRP54-202ENST00000546080 LRRC20Q8TCA0 184 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 NLNQ9BYT8 704 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 SEMA3GQ9NS98 782 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 MARCH5Q9NX47 278 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 ZSCAN32Q9NX65 697 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 GLTPQ9NZD2 209 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 NUP50Q9UKX7 468 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 BTN3A3O00478 584 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 ZNF197O14709 1029 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 PLOD3O60568 738 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 NME6O75414 186 aaPredicted RBP13.48□□□□□ -0.25
SRP54-202ENST00000546080 PSIP1O75475 530 aaKnown RBP13.48□□□□□ -0.25
SRP54-202ENST00000546080 FGF9P31371 208 aaPredicted RBP13.48□□□□□ -0.25
SRP54-202ENST00000546080 OPRD1P41143 372 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 BDKRB1P46663 353 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 EVX1P49640 407 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 CCL23P55773 120 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 TAS2R50P59544 299 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 CCSMST1Q4G0I0 132 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 SYTL3Q4VX76 610 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 BICRALQ6AI39 1079 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 MZT2AQ6P582 158 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 GPR32P1Q8NGA4 272 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 WDR48Q8TAF3 677 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 CREB3L1Q96BA8 519 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 PHF21AQ96BD5 680 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 KCNJ15Q99712 375 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 ATF6BQ99941 703 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 ISYNA1Q9NPH2 558 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 EIF3KQ9UBQ5 218 aaKnown RBP13.48□□□□□ -0.25
SRP54-202ENST00000546080 STOML2Q9UJZ1 356 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 ADAM30Q9UKF2 790 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 CDH10Q9Y6N8 788 aa13.48□□□□□ -0.25
SRP54-202ENST00000546080 TMEM129A0AVI4 362 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SEMA7AO75326 666 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 ASGR1P07306 291 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 UQCRC2P22695 453 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 AVPR1BP47901 424 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 TUFMP49411 452 aaKnown RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 PNLIPRP1P54315 467 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SMAD3P84022 425 aaKnown RBP13.47□□□□□ -0.25
SRP54-202ENST00000546080 PLD1Q13393 1074 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 RIN1Q13671 783 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 ZDHHC20Q5W0Z9 365 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 FAM71E1Q6IPT2 247 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 RASGRP3Q8IV61 690 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 OR4M2Q8NGB6 313 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 OR2AP1Q8NGE2 309 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 FOXJ1Q92949 421 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 NEIL2Q969S2 332 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 WACQ9BTA9 647 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SYNDIG1Q9H7V2 258 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 MYNNQ9NPC7 610 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 KCNE2Q9Y6J6 123 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 IRGMA1A4Y4 181 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 PIPSLA2A3N6 862 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 LINC00862A6NCI5 91 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 TEX28O15482 410 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 FABP7O15540 132 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 ADAM12O43184 909 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SGTAO43765 313 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 NCR1O76036 304 aa13.47□□□□□ -0.25
SRP54-202ENST00000546080 SLC16A8O95907 504 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms