RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PPA1Q15181 289 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 PKN2Q16513 984 aaKnown RBP3.32□□□□□ -1.88
SNHG1-224ENST00000545688 UGCGQ16739 394 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 VWA2Q5GFL6 755 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 KRBOX4Q5JUW0 171 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 FAM46CQ5VWP2 391 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 DMKNQ6E0U4 476 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-224ENST00000545688 PAMR1Q6UXH9 720 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 ABI3BPQ7Z7G0 1075 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 NAXDQ8IW45 347 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 LIPHQ8WWY8 451 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 RAD54LQ92698 747 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 RMDN1Q96DB5 314 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 ANKRD27Q96NW4 1050 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 NAA11Q9BSU3 229 aaPredicted RBP3.32□□□□□ -1.88
SNHG1-224ENST00000545688 ARMCX1Q9P291 453 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 Q9UF83 564 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 FAM205AQ6ZU69 1335 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 ROCK2O75116 1388 aaKnown RBP3.32□□□□□ -1.88
SNHG1-224ENST00000545688 SLX4Q8IY92 1834 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 ANKRD31Q8N7Z5 1873 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 KIAA0100Q14667 2235 aaKnown RBP3.32□□□□□ -1.88
SNHG1-224ENST00000545688 CEP290O15078 2479 aa3.32□□□□□ -1.88
SNHG1-224ENST00000545688 TJP1Q07157 1748 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 TRAV9-2A0A087WT02 112 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 BCLAF3A2AJT9 711 aaKnown RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 ZNF732B4DXR9 585 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 H0Y9J4 135 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 CDX4O14627 284 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 FLRT2O43155 660 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 SRPX2O60687 465 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 PRB2P02812 416 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 DLATP10515 647 aaKnown RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 IST1P53990 364 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 RPS27AP62979 156 aaKnown RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 NAAAQ02083 359 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 RBBP4Q09028 425 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 CAMK2DQ13557 499 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 PCK2Q16822 640 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 HYAL4Q2M3T9 481 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 KLHL10Q6JEL2 608 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 NEPROQ6NW34 567 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 SLC27A4Q6P1M0 643 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 ARMCX5Q6P1M9 558 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 RFWD3Q6PCD5 774 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 OLFM4Q6UX06 510 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 C17orf107Q6ZR85 190 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 C11orf57Q6ZUT1 292 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 NUFIP2Q7Z417 695 aaKnown RBP3.31□□□□□ -1.88
SNHG1-224ENST00000545688 SMPDL3AQ92484 453 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 HSD17B14Q9BPX1 270 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 NACAP1Q9BZK3 213 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 UBQLN3Q9H347 655 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 PRO3102Q9H379 93 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 PDFQ9HBH1 243 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 SNX7Q9UNH6 387 aa3.31□□□□□ -1.88
SNHG1-224ENST00000545688 MOCS2O96007 188 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-224ENST00000545688 PIGRP01833 764 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 ADARP55265 1226 aaKnown RBP3.3□□□□□ -1.88
SNHG1-224ENST00000545688 FASTKQ14296 549 aaKnown RBP3.3□□□□□ -1.88
SNHG1-224ENST00000545688 ZNF273Q14593 569 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 C6orf136Q5SQH8 315 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 SLC43A2Q8N370 569 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 ZNRF1Q8ND25 227 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 OR6F1Q8NGZ6 308 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 NCOA7Q8NI08 942 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 GTSF1Q8WW33 167 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 PHYHIPLQ96FC7 376 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 TSSK2Q96PF2 358 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 ANKRD26Q9UPS8 1709 aa3.3□□□□□ -1.88
SNHG1-224ENST00000545688 MRC1P22897 1456 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 TTC28Q96AY4 2481 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 TRPM7Q96QT4 1865 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 FOXI3A8MTJ6 420 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-224ENST00000545688 CCDC188H7C350 402 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 PPIP5K2O43314 1243 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 FCGR3BO75015 233 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 FRAT2O75474 233 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-224ENST00000545688 DNTTP04053 509 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 SP9P0CG40 484 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 LBPP18428 481 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 PSMB4P28070 264 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 SLC1A3P43003 542 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 SLC1A6P48664 564 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 EIF4EBP2Q13542 120 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-224ENST00000545688 RFTN2Q52LD8 501 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-224ENST00000545688 ZNF770Q6IQ21 691 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-224ENST00000545688 CLEC4GQ6UXB4 293 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 VASH2Q86V25 355 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 TBC1D10CQ8IV04 446 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 PRR22Q8IZ63 422 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 CCAR2Q8N163 923 aaKnown RBP3.29□□□□□ -1.88
SNHG1-224ENST00000545688 CARNMT1Q8N4J0 409 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 PCNPQ8WW12 178 aaKnown RBP3.29□□□□□ -1.88
SNHG1-224ENST00000545688 NMUR1Q9HB89 426 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 IL17CQ9P0M4 197 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 RSPH14Q9UHP6 348 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 SH3GLB1Q9Y371 365 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 EYSQ5T1H1 3165 aa3.29□□□□□ -1.88
SNHG1-224ENST00000545688 PRUNE2Q8WUY3 3088 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms