RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 MEX3BQ6ZN04 569 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 Q6ZTC4 211 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 MOB2Q70IA6 237 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 MAB21L3Q8N8X9 362 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 RNF149Q8NC42 400 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 KLHDC9Q8NEP7 349 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 DMBX1Q8NFW5 382 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CCDC110Q8TBZ0 833 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 U2AF1L4Q8WU68 220 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 APOBEC4Q8WW27 367 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CD101Q93033 1021 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 GLYATL1Q969I3 302 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 SLC35C1Q96A29 364 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 BPIFA2Q96DR5 249 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 C10orf90Q96M02 699 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 GPR137Q96N19 417 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 COQ7Q99807 217 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 NUSAP1Q9BXS6 441 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 COA1Q9GZY4 146 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 RAB17Q9H0T7 212 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 TRPV6Q9H1D0 765 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 MTIF3Q9H2K0 278 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 DPH5Q9H2P9 285 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 C6orf106Q9H6K1 298 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 SIX2Q9NPC8 291 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 DDX28Q9NUL7 540 aaKnown RBP3.61□□□□□ -1.83
SNHG1-222ENST00000545308 EXOC1Q9NV70 894 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 COPS7AQ9UBW8 275 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 CLIP2Q9UDT6 1046 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 GRID1Q9ULK0 1009 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 SATB2Q9UPW6 733 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 ERVK-19Q9WJR5 959 aa3.61□□□□□ -1.83
SNHG1-222ENST00000545308 SCN9AQ15858 1988 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 NCOR1O75376 2440 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 DOCK3Q8IZD9 2030 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 CCL15-CCL14A0A0B4J2E2 113 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 EME2A4GXA9 379 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 LACTBL1A8MY62 500 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 F8WDY8 70 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 EPHB6O15197 1021 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 CIDEAO60543 219 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 PEX11AO75192 247 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 SAP30O75446 220 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 KRT33AO76009 404 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 NCF1P14598 390 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 ANPEPP15144 967 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 PAX1P15863 534 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 MT3P25713 68 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 MARCKSP29966 332 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 TNFRSF4P43489 277 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 BTG1P62324 171 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 CCZ1BP86790 482 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 CCZ1P86791 482 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 PMP22Q01453 160 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 CDR2Q01850 454 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 PRKCEQ02156 737 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 HYAL1Q12794 435 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 CCL15Q16663 113 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 LRRC37A5PQ49AS3 106 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 LDLRAP1Q5SW96 308 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 RBMS3Q6XE24 437 aaKnown RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 LEKR1Q6ZMV7 388 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 TMEM26Q6ZUK4 368 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 C15orf52Q6ZUT6 534 aaKnown RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 C9orf139Q6ZV77 190 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 MCM10Q7L590 875 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 COPS6Q7L5N1 327 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 TRMT1LQ7Z2T5 733 aaKnown RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 TRMT11Q7Z4G4 463 aaKnown RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 AMZ2Q86W34 360 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 RNF148Q8N7C7 305 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 OR56B1Q8NGI3 324 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 OPTNQ96CV9 577 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 NECTIN4Q96NY8 510 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 LPAR4Q99677 370 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 SSX3Q99909 188 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 UBAC1Q9BSL1 405 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 RWDD1Q9H446 243 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 ATP13A3Q9H7F0 1226 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF665Q9H7R5 613 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 COQ10BQ9H8M1 238 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 ECT2Q9H8V3 914 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 PPANQ9NQ55 473 aaKnown RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 SLC35D1Q9NTN3 355 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 ZFP57Q9NU63 452 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 ACOXLQ9NUZ1 547 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 ANKMY1Q9P2S6 941 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 TBK1Q9UHD2 729 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 IL20RAQ9UHF4 553 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 POMT2Q9UKY4 750 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 PLA2G4CQ9UP65 541 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 PCDHGB1Q9Y5G3 927 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 UBN2Q6ZU65 1347 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 LAMB4A4D0S4 1761 aa3.6□□□□□ -1.83
SNHG1-222ENST00000545308 RANBP2P49792 3224 aaKnown RBP3.6□□□□□ -1.83
SNHG1-222ENST00000545308 HTTP42858 3142 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 LRRC37AA6NMS7 1700 aa3.59□□□□□ -1.83
SNHG1-222ENST00000545308 A0A087WUV0 522 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-222ENST00000545308 OGTO15294 1046 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms