RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LRRC34Q8IZ02 419 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 MORN4Q8NDC4 146 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 B3GNT7Q8NFL0 401 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 ADCY4Q8NFM4 1077 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 OR7A2PQ8NGA2 310 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 RFWD2Q8NHY2 731 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 SLC2A12Q8TD20 617 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 BRIX1Q8TDN6 353 aaKnown RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 ACTRT2Q8TDY3 377 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 THAP3Q8WTV1 239 aaPredicted RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 SNRNP27Q8WVK2 155 aaKnown RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 NCLNQ969V3 563 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 MTERF3Q96E29 417 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 VMP1Q96GC9 406 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 MAGED4Q96JG8 741 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 MARK4Q96L34 752 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 FCRL1Q96LA6 429 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 AGAP4Q96P64 663 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 OR52B2Q96RD2 323 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 SIKE1Q9BRV8 207 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 DEFB126Q9BYW3 111 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 FAM107BQ9H098 131 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 NSRP1Q9H0G5 558 aaKnown RBP5.9□□□□□ -1.46
LTBR-212ENST00000543542 EPS8L2Q9H6S3 715 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 TCF7L2Q9NQB0 619 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 SLC35C2Q9NQQ7 365 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 GPR83Q9NYM4 423 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 EHD3Q9NZN3 535 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 ABI3Q9P2A4 366 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 TEKT2Q9UIF3 430 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 PCDHGB4Q9UN71 923 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 TRIM33Q9UPN9 1127 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 ERVK-19Q9WJR5 959 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CFAP47Q6ZTR5 3102 aa5.9□□□□□ -1.46
LTBR-212ENST00000543542 CROCCQ5TZA2 2017 aa5.9□□□□□ -1.47
LTBR-212ENST00000543542 A0A1W2PRB8 838 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 A0A1W2PS29 197 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 EIF4E1BA6NMX2 242 aaKnown RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 ERVH48-1M5A8F1 160 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 FCHO1O14526 889 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 ZFAND5O76080 213 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 ALDOCP09972 364 aaKnown RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 FAM87AP0C7U9 286 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 SFTPCP11686 197 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 IDO1P14902 403 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 PCSK2P16519 638 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 S100A3P33764 101 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 PTGER1P34995 402 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 CLDN8P56748 225 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 IGLV3-21P80748 117 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 HSPB3Q12988 150 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 MYBPC3Q14896 1274 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 TERF2Q15554 542 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 LTB4RQ15722 352 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 GSTA3Q16772 222 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 MEP1AQ16819 746 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 LSM12Q3MHD2 195 aaKnown RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 SPDYE7PQ495Y7 208 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 ABHD17BQ5VST6 288 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 TMEM198Q66K66 360 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 FCRLBQ6BAA4 426 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 OGFOD2Q6N063 350 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 JMJD6Q6NYC1 403 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 FAM111BQ6SJ93 734 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 HSDL2Q6YN16 418 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 DGAT2L6Q6ZPD8 337 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 MAVSQ7Z434 540 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 CPLX4Q7Z7G2 160 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 MIER2Q8N344 545 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 VWA5B2Q8N398 1253 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 KIF2BQ8N4N8 673 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 SLC5A8Q8N695 610 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 KRTCAP2Q8N6L1 136 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 NATD1Q8N6N6 113 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 VPS37AQ8NEZ2 397 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 FDCSPQ8NFU4 85 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 OR1N1Q8NGS0 311 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 OR9A2Q8NGT5 310 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 C9orf43Q8TAL5 461 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 PTPMT1Q8WUK0 201 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 TM9SF4Q92544 642 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 KAT2AQ92830 837 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 CIDECQ96AQ7 238 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 C11orf24Q96F05 449 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 CNRIP1Q96F85 164 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 ZBED6CLQ96FA7 236 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 CHMP6Q96FZ7 201 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 SENP5Q96HI0 755 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 IMMP1LQ96LU5 166 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 ZNF354BQ96LW1 612 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 GAL3ST4Q96RP7 486 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 WDR77Q9BQA1 342 aaPredicted RBP5.89□□□□□ -1.47
LTBR-212ENST00000543542 EBF4Q9BQW3 602 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 CCDC28BQ9BUN5 200 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 DUSP26Q9BV47 211 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 TMEM120AQ9BXJ8 343 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 CDCP1Q9H5V8 836 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 CCDC134Q9H6E4 229 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 MMP25Q9NPA2 562 aa5.89□□□□□ -1.47
LTBR-212ENST00000543542 AIG1Q9NVV5 245 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms