RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CD63P08962 238 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TIMP2P16035 220 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 ACSL1P33121 698 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 FOXK1P85037 733 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MGAT3Q09327 533 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MADCAM1Q13477 382 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TUBB3Q13509 450 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 NFATC4Q14934 902 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PON3Q15166 354 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PNLDC1Q8NA58 520 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 GPR26Q8NDV2 337 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 HUS1BQ8NHY5 278 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TM9SF4Q92544 642 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SGK3Q96BR1 496 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PCDHAC1Q9H158 963 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 POU2F3Q9UKI9 436 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 RIMKLBQ9ULI2 386 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SPEF1Q9Y4P9 236 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A0J9YY10 115 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MT-ATP6P00846 226 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 IFI30P13284 250 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MAGP20916 626 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 EMP2P54851 167 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 CDKN2DP55273 166 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 YPEL5P62699 121 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 CTBSQ01459 385 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 DUSP6Q16828 381 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 OR4C11Q6IEV9 310 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PXKQ7Z7A4 578 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 C10orf82Q8WW14 230 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF285Q96NJ3 590 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TIMM29Q9BSF4 260 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC12A9Q9BXP2 914 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 DSN1Q9H410 356 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 GRHPRQ9UBQ7 328 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 GIMAP2Q9UG22 337 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 CCL26Q9Y258 94 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SETD1AO15047 1707 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A1W2PQ72 361 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 ARPC2O15144 300 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 RNF13O43567 381 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 BCAS2O75934 225 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 AK1P00568 194 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC35E2BP0CK96 405 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 RPS3P23396 243 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 CSNK1DP48730 415 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 GSK3BP49841 420 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 GBX2P52951 348 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 CEBPGP53567 150 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 DMWDQ09019 674 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 POU4F2Q12837 409 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MRPL49Q13405 166 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SERTAD2Q14140 314 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PTGR1Q14914 329 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 IQCCQ4KMZ1 466 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM209BQ5JX69 171 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 OR2T5Q6IEZ7 315 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PDZD3Q86UT5 571 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 AGBL5Q8NDL9 886 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 OR2L5Q8NG80 312 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 OR2T29Q8NH02 315 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MAFAQ8NHW3 353 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 BBS10Q8TAM1 723 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TRIM43Q96BQ3 446 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 NSUN5Q96P11 429 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TBX5Q99593 518 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MAP3K3Q99759 626 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 LGR4Q9BXB1 951 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A075B6Q4 140 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 E7ESA3 106 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 NOBOXO60393 691 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 DFNA5O60443 496 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 ABLIM3O94929 683 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 HOXD8P13378 290 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PGCP20142 388 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SMSP52788 366 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PUDPQ08623 228 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PMS2P3Q13401 168 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SWI5Q1ZZU3 235 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TMPPEQ6ZT21 453 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SATL1Q86VE3 508 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 ZFAND4Q86XD8 727 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PPP1R3BQ86XI6 285 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 OR4N5Q8IXE1 308 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 CCDC54Q8NEL0 328 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 FRS2Q8WU20 508 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 C11orf24Q96F05 449 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 MYRFLQ96LU7 910 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 C1QTNF1Q9BXJ1 281 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PAK6Q9NQU5 681 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 TAS2R1Q9NYW7 299 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 STOX2Q9P2F5 926 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 CPNE7Q9UBL6 633 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 INTS6Q9UL03 887 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PTRH2Q9Y3E5 179 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 PCDHGB1Q9Y5G3 927 aa6.59□□□□□ -1.35
SRGAP1-206ENST00000543397 NUMA1Q14980 2115 aa6.59□□□□□ -1.36
SRGAP1-206ENST00000543397 hCG_1809904A0A1W2PP81 198 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms