RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 RPS13P62277 151 aaKnown RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 KCNJ10P78508 379 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 PUDPQ08623 228 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 FGL1Q08830 312 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ASAH1Q13510 395 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CEACAM7Q14002 265 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 MESDQ14696 234 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CA9Q16790 459 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RNF212Q495C1 297 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CYBRD1Q53TN4 286 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 XKR3Q5GH77 459 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 PABPC1L2AQ5JQF8 200 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 LDLRAP1Q5SW96 308 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 TPRG1LQ5T0D9 272 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ACAD10Q6JQN1 1059 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 FAM45BPQ6NSW5 357 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 EPGNQ6UW88 154 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RTL10Q7L3V2 364 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 EFL1Q7Z2Z2 1120 aaKnown RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ZNF461Q8TAF7 563 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 FAM45AQ8TCE6 357 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RORBQ92753 470 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ATP6V1E2Q96A05 226 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 KIAA1143Q96AT1 154 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 AURKBQ96GD4 344 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ZC3HAV1LQ96H79 300 aaKnown RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 TBCBQ99426 244 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 NPAS1Q99742 590 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 BCL2L14Q9BZR8 327 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ZYG11BQ9C0D3 744 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 DEFB129Q9H1M3 183 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 SEMA6AQ9H2E6 1030 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 SAV1Q9H4B6 383 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 OPA3Q9H6K4 179 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 RANBP3Q9H6Z4 567 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ELAC1Q9H777 363 aaKnown RBP5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CYP3A43Q9HB55 503 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 C3orf14Q9HBI5 128 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 POLE4Q9NR33 117 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 POT1Q9NUX5 634 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 BABAM2Q9NXR7 383 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 CTSFQ9UBX1 484 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ANAPC7Q9UJX3 599 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 FZD4Q9ULV1 537 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 ABCG2Q9UNQ0 655 aa5.55□□□□□ -1.52
XRCC4-206ENST00000542685 DICER1Q9UPY3 1922 aaKnown RBP5.54□□□□□ -1.52
XRCC4-206ENST00000542685 NRXN2Q9P2S2 1712 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 DOCK5Q9H7D0 1870 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 IGLV3-22A0A075B6J6 115 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 A0A0G2JPF8 293 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 RNF103-CHMP3A0A140T963 221 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 ATP6AP2A0A1C7CYW4 349 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 RPS10-NUDT3A0A1W2PQS6 291 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 TRABD2BA6NFA1 517 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 HNRNPCL3B7ZW38 293 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 E5RI56 91 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 CDC7O00311 574 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 PHYHO14832 338 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 SYN3O14994 580 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 TO15178 435 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 CLDN3O15551 220 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 PROSCO94903 275 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 MT-ND5P03915 603 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 RAF1P04049 648 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 HEXBP07686 556 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 HNRNPCL4P0DMR1 293 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 UNGP13051 313 aaPredicted RBP5.54□□□□□ -1.52
XRCC4-206ENST00000542685 CSF2RAP15509 400 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 SPNP16150 400 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 ARF4P18085 180 aaPredicted RBP5.54□□□□□ -1.52
XRCC4-206ENST00000542685 MSH3P20585 1137 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 GLRA2P23416 452 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 OXTRP30559 389 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 ACSL1P33121 698 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 THBS4P35443 961 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 ATP5OP48047 213 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 SLC1A6P48664 564 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 CCT3P49368 545 aaKnown RBP5.54□□□□□ -1.52
XRCC4-206ENST00000542685 ERFP50548 548 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 P2RY4P51582 365 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 VAMP7P51809 220 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 TKTL1P51854 596 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 RIDAP52758 137 aaKnown RBP5.54□□□□□ -1.52
XRCC4-206ENST00000542685 TAS2R60P59551 318 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 GPX6P59796 221 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 ERVK-8P63133 956 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 HTRA4P83105 476 aaPredicted RBP5.54□□□□□ -1.52
XRCC4-206ENST00000542685 CHAF1BQ13112 559 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 PRKG2Q13237 762 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 DMP1Q13316 513 aaPredicted RBP5.54□□□□□ -1.52
XRCC4-206ENST00000542685 EMC2Q15006 297 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 LRRC26Q2I0M4 334 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 AP5B1Q2VPB7 878 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 RFX4Q33E94 735 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 UGT3A2Q3SY77 523 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 DNLZQ5SXM8 178 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 TPGS2Q68CL5 300 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 ARHGAP17Q68EM7 881 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 KDM4DQ6B0I6 523 aa5.54□□□□□ -1.52
XRCC4-206ENST00000542685 GRHL2Q6ISB3 625 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms