RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 MMP27Q9H306 513 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 CA5BQ9Y2D0 317 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 CAB39Q9Y376 341 aaPredicted RBP14.02□□□□□ -0.17
DDX55-209ENST00000542286 GPSM3Q9Y4H4 160 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 PCDHGA2Q9Y5H1 932 aa14.02□□□□□ -0.17
DDX55-209ENST00000542286 DOCK8Q8NF50 2099 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 ALPK3Q96L96 1907 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 LOC100506127A0A0U1RQW1 187 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 PRAMEF27A3QJZ7 478 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 PDZK1P1A8MUH7 402 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 KAT7O95251 611 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 PTX3P26022 381 aaPredicted RBP14.01□□□□□ -0.17
DDX55-209ENST00000542286 TGFBR2P37173 567 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 SEC23BQ15437 767 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 SYPL1Q16563 259 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 ATAD3CQ5T2N8 411 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 AGBL4Q5VU57 503 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 KIAA1211LQ6NV74 962 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 TRIM40Q6P9F5 258 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 TUBA3EQ6PEY2 450 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 DEF8Q6ZN54 512 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 UBE3DQ7Z6J8 389 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 PEX5LQ8IYB4 626 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 HDDC3Q8N4P3 179 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 FBXO15Q8NCQ5 510 aaPredicted RBP14.01□□□□□ -0.17
DDX55-209ENST00000542286 GPR32P1Q8NGA4 272 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 GANCQ8TET4 914 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 TBC1D20Q96BZ9 403 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 COX14Q96I36 57 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 TEFMQ96QE5 360 aaKnown RBP14.01□□□□□ -0.17
DDX55-209ENST00000542286 SNX18Q96RF0 628 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 DPEP2Q9H4A9 486 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 ANKHQ9HCJ1 492 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 CD93Q9NPY3 652 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 BOLA1Q9Y3E2 137 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 M0R082 166 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 RB1P06400 928 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 KELP23276 732 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 FCARP24071 287 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 TIE1P35590 1138 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 IRF4Q15306 451 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 MICAQ29983 383 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 PROX2Q3B8N5 592 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 PSD4Q8NDX1 1056 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 OR5K2Q8NHB8 316 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 LINC00615Q96LM1 132 aaPredicted RBP14.01□□□□□ -0.17
DDX55-209ENST00000542286 MS4A8Q9BY19 250 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 GPR34Q9UPC5 381 aa14.01□□□□□ -0.17
DDX55-209ENST00000542286 LINC01565O15544 149 aa14□□□□□ -0.17
DDX55-209ENST00000542286 GADD45GO95257 159 aa14□□□□□ -0.17
DDX55-209ENST00000542286 PTHP01270 115 aa14□□□□□ -0.17
DDX55-209ENST00000542286 PPIBP23284 216 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 GGT2P36268 569 aa14□□□□□ -0.17
DDX55-209ENST00000542286 CLK1P49759 484 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 TMEM52BQ4KMG9 183 aa14□□□□□ -0.17
DDX55-209ENST00000542286 SIGIRRQ6IA17 410 aa14□□□□□ -0.17
DDX55-209ENST00000542286 ZNF793Q6ZN11 406 aa14□□□□□ -0.17
DDX55-209ENST00000542286 OXR1Q8N573 874 aa14□□□□□ -0.17
DDX55-209ENST00000542286 TP53I13Q8NBR0 393 aaPredicted RBP14□□□□□ -0.17
DDX55-209ENST00000542286 HCAR2Q8TDS4 363 aa14□□□□□ -0.17
DDX55-209ENST00000542286 PITX2Q99697 317 aa14□□□□□ -0.17
DDX55-209ENST00000542286 NLNQ9BYT8 704 aa14□□□□□ -0.17
DDX55-209ENST00000542286 ZFR2Q9UPR6 939 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 CORO2BQ9UQ03 480 aa14□□□□□ -0.17
DDX55-209ENST00000542286 MDC1Q14676 2089 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 OR2A25A4D2G3 310 aa14□□□□□ -0.17
DDX55-209ENST00000542286 ADAMDEC1O15204 470 aa14□□□□□ -0.17
DDX55-209ENST00000542286 ERAL1O75616 437 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 SLC35G4P0C7Q5 338 aa14□□□□□ -0.17
DDX55-209ENST00000542286 OR12D1P0DN82 309 aa14□□□□□ -0.17
DDX55-209ENST00000542286 ARAFP10398 606 aa14□□□□□ -0.17
DDX55-209ENST00000542286 GADD45AP24522 165 aa14□□□□□ -0.17
DDX55-209ENST00000542286 CTSKP43235 329 aa14□□□□□ -0.17
DDX55-209ENST00000542286 XCR1P46094 333 aa14□□□□□ -0.17
DDX55-209ENST00000542286 DUSP2Q05923 314 aa14□□□□□ -0.17
DDX55-209ENST00000542286 FCHO2Q0JRZ9 810 aa14□□□□□ -0.17
DDX55-209ENST00000542286 PTGES3Q15185 160 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 METRNLQ641Q3 311 aa14□□□□□ -0.17
DDX55-209ENST00000542286 C6orf120Q7Z4R8 191 aa14□□□□□ -0.17
DDX55-209ENST00000542286 KRT78Q8N1N4 520 aa14□□□□□ -0.17
DDX55-209ENST00000542286 PARP16Q8N5Y8 322 aa14□□□□□ -0.17
DDX55-209ENST00000542286 KIAA1958Q8N8K9 716 aa14□□□□□ -0.17
DDX55-209ENST00000542286 XAGE5Q8WWM1 108 aa14□□□□□ -0.17
DDX55-209ENST00000542286 DEPDC7Q96QD5 511 aa14□□□□□ -0.17
DDX55-209ENST00000542286 GABARAPL3Q9BY60 117 aa14□□□□□ -0.17
DDX55-209ENST00000542286 WDR70Q9NW82 654 aa14□□□□□ -0.17
DDX55-209ENST00000542286 MS4A12Q9NXJ0 267 aa14□□□□□ -0.17
DDX55-209ENST00000542286 STON1Q9Y6Q2 735 aa14□□□□□ -0.17
DDX55-209ENST00000542286 C17orf113A0A1B0GUU1 675 aa14□□□□□ -0.17
DDX55-209ENST00000542286 M0R3H8 397 aa14□□□□□ -0.17
DDX55-209ENST00000542286 CCRL2O00421 344 aa14□□□□□ -0.17
DDX55-209ENST00000542286 VEGFDO43915 354 aa14□□□□□ -0.17
DDX55-209ENST00000542286 DDCP20711 480 aa14□□□□□ -0.17
DDX55-209ENST00000542286 ENDOUP21128 410 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 PIK3CBP42338 1070 aa14□□□□□ -0.17
DDX55-209ENST00000542286 PCBP3P57721 371 aaKnown RBP14□□□□□ -0.17
DDX55-209ENST00000542286 GNG2P59768 71 aa14□□□□□ -0.17
DDX55-209ENST00000542286 DBPQ10586 325 aaPredicted RBP14□□□□□ -0.17
DDX55-209ENST00000542286 CDK10Q15131 360 aa14□□□□□ -0.17
DDX55-209ENST00000542286 GPR19Q15760 415 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms