RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RDH14Q9HBH5 336 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 VNN3Q9NY84 501 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 TNFRSF10DQ9UBN6 386 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 AHCTF1Q8WYP5 2266 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 RIIAD1A6NNX1 92 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 CLCA1A8K7I4 914 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 B3GALT2O43825 422 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 GPR37L1O60883 481 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 C1orf105O95561 183 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 CERS1P27544 350 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 NR4A2P43354 598 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 SMSP52788 366 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 TAP2Q03519 686 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 PTRH1Q86Y79 214 aaKnown RBP15.33■□□□□ 0.04
VARS2-212ENST00000542001 SECISBP2Q96T21 854 aaKnown RBP15.33■□□□□ 0.04
VARS2-212ENST00000542001 SLC6A17Q9H1V8 727 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 ACTL8Q9H568 366 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 ACOT13Q9NPJ3 140 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 ENPP5Q9UJA9 477 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 POU2F3Q9UKI9 436 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 CORINQ9Y5Q5 1042 aa15.33■□□□□ 0.04
VARS2-212ENST00000542001 A0A1B0GVT2 93 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 ABLIM3O94929 683 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 HIST1H2ABP04908 130 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 ACVR1BP36896 505 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 HIST3H2AQ7L7L0 130 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 CXXC5Q7LFL8 322 aaKnown RBP15.32■□□□□ 0.04
VARS2-212ENST00000542001 PAPD5Q8NDF8 572 aaKnown RBP15.32■□□□□ 0.04
VARS2-212ENST00000542001 NUP43Q8NFH3 380 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 HIST1H2ACQ93077 130 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 CHIAQ9BZP6 476 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 PCBD2Q9H0N5 130 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 ABCG4Q9H172 646 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 IL21RQ9HBE5 538 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 TMEM138Q9NPI0 162 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 STARD5Q9NSY2 213 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 FAIMQ9NVQ4 179 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 NEU3Q9UQ49 428 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 CSNK1G3Q9Y6M4 447 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 H0YC42 278 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 SLC16A5O15375 505 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 PCDHGA12O60330 932 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 HMGN2P05204 90 aaKnown RBP15.32■□□□□ 0.04
VARS2-212ENST00000542001 GRPRP30550 384 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 NIPAL1Q6NVV3 410 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 ZNF683Q8IZ20 524 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 HORMAD2Q8N7B1 307 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 OR8K3Q8NH51 312 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 GREB1LQ9C091 1923 aaPredicted RBP15.32■□□□□ 0.04
VARS2-212ENST00000542001 MAGIXQ9H6Y5 334 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 SNX7Q9UNH6 387 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 PRAMEF33A0A0G2JMD5 474 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 H7C0S8 307 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 PRAMEF10O60809 474 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 C1QCP02747 245 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 BMPR1AP36894 532 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 ADARB1P78563 741 aaKnown RBP15.32■□□□□ 0.04
VARS2-212ENST00000542001 PROX2Q3B8N5 592 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 LHX8Q68G74 356 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 CBLL1Q75N03 491 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 PRSS48Q7RTY5 328 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 OR13F1Q8NGS4 319 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 OR5P2Q8WZ92 322 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 CWH43Q9H720 699 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 BTNL2Q9UIR0 455 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 MSRAQ9UJ68 235 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 TET1Q8NFU7 2136 aa15.32■□□□□ 0.04
VARS2-212ENST00000542001 TPRP12270 2363 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 OR6C70A6NIJ9 312 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 GFRA2O00451 464 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 KHNYNO15037 678 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 SLC2A2P11168 524 aaPredicted RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 SDC2P34741 201 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 MC3RP41968 323 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 CLK3P49761 638 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 KCNC3Q14003 757 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 SUZ12Q15022 739 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 C6orf132Q5T0Z8 1188 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 PRPF38BQ5VTL8 546 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 TRIM46Q7Z4K8 759 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 TEX10Q9NXF1 929 aaPredicted RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 PLEKHM1Q9Y4G2 1056 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 TRBV4-1A0A0J9YWV2 114 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 PPM1DO15297 605 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 PTHP01270 115 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 RLN1P04808 185 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 DDX6P26196 483 aaKnown RBP eCLIP15.31■□□□□ 0.04
VARS2-212ENST00000542001 NAA10P41227 235 aaPredicted RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 RAB14P61106 215 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 FADDQ13158 208 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 DUSP7Q16829 419 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 ASTLQ6HA08 431 aaPredicted RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 SYCE2Q6PIF2 218 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 SERPINA11Q86U17 422 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 ZBTB8BQ8NAP8 495 aaPredicted RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 TTYH2Q9BSA4 534 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 ZFR2Q9UPR6 939 aaKnown RBP15.31■□□□□ 0.04
VARS2-212ENST00000542001 TRIOBPQ9H2D6 2365 aa15.31■□□□□ 0.04
VARS2-212ENST00000542001 PTPRFP10586 1907 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms