RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CEACAM7Q14002 265 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 PDLIM3Q53GG5 364 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-217ENST00000541578 DDI2Q5TDH0 399 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 ARHGEF16Q5VV41 709 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 IL23RQ5VWK5 629 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 NKAIN2Q5VXU1 208 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 HIST2H2AA3Q6FI13 130 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 PRR5LQ6MZQ0 368 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 KDELC1Q6UW63 502 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 DHRS11Q6UWP2 260 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 TMEM26Q6ZUK4 368 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 RFPL4BQ6ZWI9 263 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 PPP1R42Q7Z4L9 355 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 NBPF5PQ86XG9 351 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-217ENST00000541578 MISPQ8IVT2 679 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CTAGE4Q8IX94 777 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 LRRC17Q8N6Y2 441 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 TCEANCQ8N8B7 351 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 IPMKQ8NFU5 416 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 SUSD6Q92537 303 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CD101Q93033 1021 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 GLYATL1Q969I3 302 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 BPIFA2Q96DR5 249 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 ST6GAL2Q96JF0 529 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CXorf58Q96LI9 332 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 IWS1Q96ST2 819 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 EPYCQ99645 322 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 NTMT1Q9BV86 223 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 FUNDC2Q9BWH2 189 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 GANQ9H2C0 597 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 C5orf66Q9H5L9 145 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 ZDHHC6Q9H6R6 413 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 EVA1AQ9H8M9 152 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 C3orf14Q9HBI5 128 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 VAT1LQ9HCJ6 419 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CENPMQ9NSP4 180 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 PLEK2Q9NYT0 353 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 VPS54Q9P1Q0 977 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 PSORS1C1Q9UIG5 152 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 MRTO4Q9UKD2 239 aaKnown RBP3.77□□□□□ -1.81
SNHG1-217ENST00000541578 GRID1Q9ULK0 1009 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 MGAT4BQ9UQ53 548 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 MRPS2Q9Y399 296 aaKnown RBP3.77□□□□□ -1.81
SNHG1-217ENST00000541578 ANKRD31Q8N7Z5 1873 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 KIF20BQ96Q89 1820 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 SCN11AQ9UI33 1791 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 A0A087WZY1 265 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 IGLV9-49A0A0B4J1Y8 123 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 TRIM64CA6NLI5 447 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 KPNA7A9QM74 516 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 C2CD4DB7Z1M9 353 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 GPR89AB7ZAQ6 455 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 DFFBO76075 338 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 MT-ND2P03891 347 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 EDN1P05305 212 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 TPM2P07951 284 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HIST1H2AGP0C0S8 130 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 GPR89BP0CG08 455 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 TPBGLP0DKB5 382 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HSPA5P11021 654 aaKnown RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 GP1BBP13224 206 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 KRT13P13646 458 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 LIFP15018 202 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 B4GALT1P15291 398 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 AMD1P17707 334 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 PRDX6P30041 224 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 MDH1P40925 334 aaKnown RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HERV-K104P63124 156 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 MYBPC1Q00872 1141 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 GABPB1Q06547 395 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 OVGP1Q12889 678 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 SNX1Q13596 522 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HEPACAMQ14CZ8 416 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 SPHARQ15513 63 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 WSCD2Q2TBF2 565 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 LRRC37A5PQ49AS3 106 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 GPR33Q49SQ1 333 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 EPC2Q52LR7 807 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 GPAT3Q53EU6 434 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HERC4Q5GLZ8 1057 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 TAF3Q5VWG9 929 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF776Q68DI1 518 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 RTL6Q6ICC9 239 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 TCEAL6Q6IPX3 200 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 TMEM64Q6YI46 380 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 RGS9BPQ6ZS82 235 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 IL17RELQ6ZVW7 336 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF771Q7L3S4 317 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 COX8CQ7Z4L0 72 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-217ENST00000541578 RNF148Q8N7C7 305 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 CCDC197Q8NCU1 140 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 GMCL1P1Q8NEA9 526 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 OR6M1Q8NGM8 313 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 CHURC1Q8WUH1 139 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 HIST1H2ACQ93077 130 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 NXPE2Q96DL1 559 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 NODALQ96S42 347 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 IL12RB2Q99665 862 aa3.76□□□□□ -1.81
SNHG1-217ENST00000541578 LPAR4Q99677 370 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms