RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PCDHB3Q9Y5E6 796 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 SLC22A7Q9Y694 548 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 GLOD5A6NK44 160 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PROM1O43490 865 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 DENRO43583 198 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 NOL3O60936 208 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 DNAJB6O75190 326 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 H6PDO95479 791 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CTSBP07858 339 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PNLIPP16233 465 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 IL1RNP18510 177 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CD1CP29017 333 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 MPLP40238 635 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PCYT1AP49585 367 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 MANFP55145 182 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 CFHR1Q03591 330 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 DNASE1L3Q13609 305 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 SPIDRQ14159 915 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 ZIK1Q3SY52 487 aaPredicted RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 AASDHQ4L235 1098 aaPredicted RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 C18orf63Q68DL7 685 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 EID2Q8N6I1 236 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 TMCO5AQ8N6Q1 288 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 TNIP2Q8NFZ5 429 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CANT1Q8WVQ1 401 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CXorf21Q9HAI6 301 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 SLC35C2Q9NQQ7 365 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 C6orf203Q9P0P8 240 aaPredicted RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 PHF11Q9UIL8 331 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 RAB26Q9ULW5 256 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PLCL2Q9UPR0 1127 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CORINQ9Y5Q5 1042 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 NR2F6P10588 404 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PPIBP23284 216 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 CSF2RBP32927 897 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 BUD31P41223 144 aaPredicted RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 ARL4DP49703 201 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 BCAP31P51572 246 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 LIM2P55344 173 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PCBP4P57723 403 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 NUP107P57740 925 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 ABHD18Q0P651 414 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 SNAP47Q5SQN1 464 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 GLYATQ6IB77 296 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 ZFP1Q6P2D0 407 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 GUSBP11Q6P575 273 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PRSS41Q7RTY9 318 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 ZC3H7AQ8IWR0 971 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 SHISA5Q8N114 240 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PNPT1Q8TCS8 783 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 ZFP90Q8TF47 636 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 OR5P2Q8WZ92 322 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 ZBED6CLQ96FA7 236 aaPredicted RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 FBXL20Q96IG2 436 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 ARRDC1-AS1Q9H2J1 176 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 SMOC1Q9H4F8 434 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 NEUROD4Q9HD90 331 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 DAPP1Q9UN19 280 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CORO2BQ9UQ03 480 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 NAALAD2Q9Y3Q0 740 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 AP4S1Q9Y587 144 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 MN1Q10571 1320 aaPredicted RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 LY6G6EA0A0G2JKS1 128 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 TCRBV5S2A0A599 114 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 ELOVL7A1L3X0 281 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 FAM86C2PA6NEL3 165 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 ZNF860A6NHJ4 632 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 AQP12BA6NM10 295 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 PGRMC2O15173 223 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 PCDHGA12O60330 932 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 GALR3O60755 368 aaPredicted RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 GMNNO75496 209 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 ERAL1O75616 437 aaKnown RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 NTRK1P04629 796 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 GGT1P19440 569 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 CPN2P22792 545 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 SOAT1P35610 550 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 FRKP42685 505 aaPredicted RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 GABRA4P48169 554 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 SEPHS1P49903 392 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 CDK9P50750 372 aaKnown RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 TNFRSF17Q02223 184 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 RUNX2Q13950 521 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 PRTGQ2VWP7 1150 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 SLC48A1Q6P1K1 146 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 WDR74Q6RFH5 385 aaPredicted RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 Q6ZNX1 250 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 GPR155Q7Z3F1 870 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 BTLAQ7Z6A9 289 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 PROSER1Q86XN7 944 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 AQP12AQ8IXF9 295 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 DUS3LQ96G46 650 aaKnown RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 LOXL4Q96JB6 756 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 SLC35A5Q9BS91 424 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 SIAEQ9HAT2 523 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 ACSS1Q9NUB1 689 aaPredicted RBP8.19□□□□□ -1.1
THBS3-210ENST00000541576 MS4A12Q9NXJ0 267 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 TMEM9Q9P0T7 183 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 MAGEL2Q9UJ55 1249 aa8.19□□□□□ -1.1
THBS3-210ENST00000541576 RIMS3Q9UJD0 308 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms