RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 TESQ9UGI8 421 aaKnown RBP11.66□□□□□ -0.54
NPC1-202ENST00000540608 IL36AQ9UHA7 158 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 SNX7Q9UNH6 387 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 ANKRD34BA5PLL1 514 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 A6NL46 340 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 PI15O43692 258 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 TLX2O43763 284 aaPredicted RBP11.66□□□□□ -0.54
NPC1-202ENST00000540608 TBX19O60806 448 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 TYRP14679 529 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 BNC1Q01954 994 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 MXD1Q05195 221 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 POM121L1PQ3SYA9 428 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 FAM131AQ6UXB0 335 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 HSDL2Q6YN16 418 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 OR52I1Q8NGK6 324 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 SLC7A13Q8TCU3 470 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 HCAR2Q8TDS4 363 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 CYB5D2Q8WUJ1 264 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 RASSF5Q8WWW0 418 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 RAB8BQ92930 207 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 TCEAL4Q96EI5 215 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 MRGPRX3Q96LB0 322 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 POLDIP3Q9BY77 421 aaKnown RBP11.66□□□□□ -0.54
NPC1-202ENST00000540608 ZBP1Q9H171 429 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 MMP28Q9H239 520 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 LINC00597Q9H2U6 94 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 MIXL1Q9H2W2 232 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 TMEM245Q9H330 911 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 MTG2Q9H4K7 406 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 PAK6Q9NQU5 681 aaPredicted RBP11.66□□□□□ -0.54
NPC1-202ENST00000540608 SEMA3GQ9NS98 782 aa11.66□□□□□ -0.54
NPC1-202ENST00000540608 PLEKHB1Q9UF11 243 aaPredicted RBP11.66□□□□□ -0.54
NPC1-202ENST00000540608 FABP12A6NFH5 140 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 SCO2O43819 266 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 PRKYO43930 277 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 RAB36O95755 333 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 MSL3P1P0C860 447 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 TNNI3P19429 210 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 CXCR2P25025 360 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 CNTN1Q12860 1018 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 COX10Q12887 443 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 TAB1Q15750 504 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 LILRA6Q6PI73 481 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 CD300LDQ6UXZ3 194 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 ADGRF3Q8IZF5 1079 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 RDH10Q8IZV5 341 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 ZNF557Q8N988 423 aaPredicted RBP11.65□□□□□ -0.54
NPC1-202ENST00000540608 SIMC1Q8NDZ2 872 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 TM4SF18Q96CE8 201 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 DMRTB1Q96MA1 342 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 DEPDC7Q96QD5 511 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 ZNF607Q96SK3 696 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 GDF15Q99988 308 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 WFDC6Q9BQY6 131 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 KLHL20Q9Y2M5 609 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 LINC00854A0A1B0GVQ3 168 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 A0A1W2PQL4 384 aaPredicted RBP11.65□□□□□ -0.54
NPC1-202ENST00000540608 CCDC182A6NF36 153 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 A8MV72 311 aaPredicted RBP11.65□□□□□ -0.54
NPC1-202ENST00000540608 HMGN4O00479 90 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 SH3BP5O60239 455 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 B4GALT2O60909 372 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 NNMTP40261 264 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 ETV5P41161 510 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 ETV1P50549 477 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 MAPK12P53778 367 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 GRIN2CQ14957 1233 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 CCDC149Q6ZUS6 474 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 FAM129CQ86XR2 697 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 GALNT12Q8IXK2 581 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 KRT78Q8N1N4 520 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 CELF5Q8N6W0 485 aaKnown RBP11.65□□□□□ -0.54
NPC1-202ENST00000540608 LRIG1Q96JA1 1093 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 NELL2Q99435 816 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 MVB12BQ9H7P6 319 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 NEUROD4Q9HD90 331 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 A4GNTQ9UNA3 340 aa11.65□□□□□ -0.54
NPC1-202ENST00000540608 ANHXE9PGG2 379 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 PLPP1O14494 284 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 TFECO14948 347 aaPredicted RBP11.64□□□□□ -0.55
NPC1-202ENST00000540608 PDPK1O15530 556 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 FGF18O76093 207 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 CSF3P09919 207 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 SYN1P17600 705 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 SLC9A3P48764 834 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 PCBP4P57723 403 aaKnown RBP11.64□□□□□ -0.55
NPC1-202ENST00000540608 HTRA3P83110 453 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 EFNB1P98172 346 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 HNRNPA0Q13151 305 aaKnown RBP11.64□□□□□ -0.55
NPC1-202ENST00000540608 SYT14P1Q58G82 188 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 PRAMEF14Q5SWL7 426 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 SLC35F1Q5T1Q4 408 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 PDZK1Q5T2W1 519 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 PRAMEF13Q5VWM6 474 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 LCTLQ6UWM7 567 aa11.64□□□□□ -0.55
NPC1-202ENST00000540608 TRMT11Q7Z4G4 463 aaKnown RBP11.64□□□□□ -0.55
NPC1-202ENST00000540608 KIAA0907Q7Z7F0 614 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms