RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 BBIP1A8MTZ0 92 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MRASO14807 208 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 C6orf47O95873 294 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PORP16435 677 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TCN2P20062 427 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CD82P27701 267 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NTSP30990 170 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PTGER1P34995 402 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 STX4Q12846 297 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 BNIP1Q12981 228 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 COQ5Q5HYK3 327 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ZNF551Q7Z340 670 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SAMD14Q8IZD0 417 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 VPS37AQ8NEZ2 397 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ZBED6CLQ96FA7 236 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CCDC115Q96NT0 180 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ALOXE3Q9BYJ1 711 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RMND5AQ9H871 391 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ACSS1Q9NUB1 689 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SLAMF8Q9P0V8 285 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 BTNL2Q9UIR0 455 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 LOC400499M0QZD8 3231 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 IDSB3KWA1 339 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 AIM2O14862 343 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 KLF7O75840 302 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CALB2P22676 271 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MPIP34949 423 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CDKN2CP42773 168 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NCBP2P52298 156 aaKnown RBP eCLIP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MANFP55145 182 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 HBA1P69905 142 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SPRED3Q2MJR0 410 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 FAM69BQ5VUD6 431 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 LRRC25Q8N386 305 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DPP10Q8N608 796 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ENDOVQ8N8Q3 282 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PLPP5Q8NEB5 264 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 OR5P2Q8WZ92 322 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PPWD1Q96BP3 646 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ITCHQ96J02 903 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 THSD1Q9NS62 852 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NXT1Q9UKK6 140 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ACSL6Q9UKU0 697 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MAN2B2Q9Y2E5 1009 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RRP9O43818 475 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CPSF4O95639 269 aaKnown RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SLC35E2P0CK97 266 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 STAT5AP42229 794 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 HSPB3Q12988 150 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MLC1Q15049 377 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 LTB4RQ15722 352 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 C6orf10Q5SRN2 563 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CPZQ66K79 652 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DNAJC14Q6Y2X3 702 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DGAT2L6Q6ZPD8 337 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DTX1Q86Y01 620 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PANX1Q96RD7 426 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TUBB6Q9BUF5 446 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CRB3Q9BUF7 120 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 EFCAB1Q9HAE3 211 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SLC6A13Q9NSD5 602 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 C3orf18Q9UK00 162 aa17.72■□□□□ 0.43
TNFRSF1A-213ENST00000540022 AHCTF1Q8WYP5 2266 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TCRBV16S1A1N1A0A5B0 115 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RFXANKO14593 260 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ATP1B1P05026 303 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 GSNP06396 782 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 HEXBP07686 556 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ABCB1P08183 1280 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RAB40ALP0C0E4 278 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CDK9P50750 372 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 EMP2P54851 167 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 LRRC74AQ0VAA2 488 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NFYCQ13952 458 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SERTAD2Q14140 314 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NSDHLQ15738 373 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TBC1D25Q3MII6 688 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 GTDC1Q4AE62 458 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 FAAH2Q6GMR7 532 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DLEU7Q6UYE1 221 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ST13P4Q8IZP2 240 aaPredicted RBP17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 OR4A15Q8NGL6 344 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 OR9A2Q8NGT5 310 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ZFP28Q8NHY6 868 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 FBXO27Q8NI29 283 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NKD1Q969G9 470 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TRIM4Q9C037 500 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PAIP1Q9H074 479 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TAS2R9Q9NYW1 312 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CROTQ9UKG9 612 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PCDHGB4Q9UN71 923 aa17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PTRH2Q9Y3E5 179 aaKnown RBP17.71■□□□□ 0.43
TNFRSF1A-213ENST00000540022 A0A087WV48 116 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 LOC101059948A0A1B0GTJ6 334 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 TERTO14746 1132 aaKnown RBP17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 ALOX12BO75342 701 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 UMODP07911 640 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 F8A1P23610 371 aa17.7■□□□□ 0.42
TNFRSF1A-213ENST00000540022 PTPN6P29350 595 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms