RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 A0A0G2JN53 185 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 OR6C76A6NM76 312 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 FXYD1O00168 92 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 PLD2O14939 933 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 SCN2BO60939 215 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 MT-CO3P00414 261 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 TNNI3P19429 210 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 NT5EP21589 574 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 LCN1P31025 176 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 IFNA8P32881 189 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 STT3AP46977 705 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ZFP36L2P47974 494 aaKnown RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 HBA1P69905 142 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 MRPS22P82650 360 aaKnown RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 FOLH1Q04609 750 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ELAVL1Q15717 326 aaKnown RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 ISXQ2M1V0 245 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 NKAIN1Q4KMZ8 207 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 FAM98BQ52LJ0 330 aaKnown RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 CDCP2Q5VXM1 449 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ZNF574Q6ZN55 896 aaPredicted RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 SZRD1Q7Z422 152 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ANKRD46Q86W74 232 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 MICU2Q8IYU8 434 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 VWA5B2Q8N398 1253 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ESX1Q8N693 406 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 MIPOL1Q8TD10 442 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ZFP90Q8TF47 636 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 RIT1Q92963 219 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 CCDC124Q96CT7 223 aaKnown RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 SLC35G5Q96KT7 338 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 IP6K3Q96PC2 410 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 MACROD1Q9BQ69 325 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 CPPED1Q9BRF8 314 aaPredicted RBP11.09□□□□□ -0.63
VTN-202ENST00000539746 ACTRT3Q9BYD9 372 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ULBP3Q9BZM4 244 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 ADAP2Q9NPF8 381 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 VAPAQ9P0L0 249 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 NTMQ9P121 344 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 SLC7A8Q9UHI5 535 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 CES1P1Q9UKY3 287 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 POMPQ9Y244 141 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 LOXL2Q9Y4K0 774 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 CLCA3PQ9Y6N3 262 aa11.09□□□□□ -0.63
VTN-202ENST00000539746 TMEM131Q92545 1883 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 PI4KAP42356 2102 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 IGLV3-12A0A075B6K2 115 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 TRBV5-3A0A0A0MS03 114 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 FOXS1O43638 330 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 BRINP1O60477 761 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 IFNA16P05015 189 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 HEXBP07686 556 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 GUSBP08236 651 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 ITGA2P17301 1181 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 RBMS1P29558 406 aaKnown RBP11.08□□□□□ -0.64
VTN-202ENST00000539746 RORAP35398 523 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 CRISP3P54108 245 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 POLE2P56282 527 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 WNT3P56703 355 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 DSTNP60981 165 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 KCNJ2P63252 427 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 IGLV3-21P80748 117 aaPredicted RBP11.08□□□□□ -0.64
VTN-202ENST00000539746 MC1RQ01726 317 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 MAP4K2Q12851 820 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 RUNX2Q13950 521 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 GK3PQ14409 553 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 CAPRIN1Q14444 709 aaKnown RBP11.08□□□□□ -0.64
VTN-202ENST00000539746 KCNAB1Q14722 419 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 RGNQ15493 299 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 SPRED3Q2MJR0 410 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 MINDY4Q4G0A6 757 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 SAXO2Q658L1 398 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 LCN8Q6JVE9 175 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 OVCH1Q7RTY7 1134 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 PDSS2Q86YH6 399 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 FAM13CQ8NE31 585 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 HIPK4Q8NE63 616 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 PLPP5Q8NEB5 264 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 CATSPER1Q8NEC5 780 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 SLC26A7Q8TE54 656 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 ADAMTS15Q8TE58 950 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 NR4A3Q92570 626 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 FAM162AQ96A26 154 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 ELP4Q96EB1 424 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 DTNBP1Q96EV8 351 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 PEX11GQ96HA9 241 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 STACQ99469 402 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 BTBD2Q9BX70 525 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 GLIPR2Q9H4G4 154 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 STARD5Q9NSY2 213 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 TMEM9Q9P0T7 183 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 HCN3Q9P1Z3 774 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 CD300AQ9UGN4 299 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 SLC13A4Q9UKG4 626 aa11.08□□□□□ -0.64
VTN-202ENST00000539746 CDV3Q9UKY7 258 aaKnown RBP11.08□□□□□ -0.64
VTN-202ENST00000539746 TDRD6O60522 2096 aaKnown RBP11.08□□□□□ -0.64
VTN-202ENST00000539746 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.07□□□□□ -0.64
VTN-202ENST00000539746 ASPDHA6ND91 283 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms