RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CT62P0C5K7 136 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 COX7A2P14406 83 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 CSNK2A2P19784 350 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 NT5EP21589 574 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 EPHA3P29320 983 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 PTGER1P34995 402 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ASMTP46597 345 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 DIO3P55073 304 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ERVK-8P63133 956 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 GUCY1A3Q02108 690 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 PTGR1Q14914 329 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF385BQ569K4 471 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 IRAK1BP1Q5VVH5 260 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 B3GNTL1Q67FW5 361 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 FCRLBQ6BAA4 426 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ANKRD26P1Q6NSI1 321 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 JMJD6Q6NYC1 403 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 SLC2A12Q8TD20 617 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF721Q8TF20 911 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 RIT1Q92963 219 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 VMP1Q96GC9 406 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 SMAD5Q99717 465 aaKnown RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 SEMA4CQ9C0C4 833 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 OR8D2Q9GZM6 311 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 REEP4Q9H6H4 257 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ZBTB20Q9HC78 741 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 SLC35C2Q9NQQ7 365 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ASIC5Q9NY37 505 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 NOP53Q9NZM5 478 aaKnown RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 EHD3Q9NZN3 535 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 TUBD1Q9UJT1 453 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 PPIEQ9UNP9 301 aaKnown RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ENTPD4Q9Y227 616 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 TP53TG5Q9Y2B4 290 aa11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 PCDHGA9Q9Y5G4 932 aaKnown RBP11.85□□□□□ -0.51
TSPAN9-207ENST00000539631 ATMQ13315 3056 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 ITPR1Q14643 2758 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 PRKNO60260 465 aaPredicted RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 EDF1O60869 148 aaKnown RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 DIAPH2O60879 1101 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 ALDOCP09972 364 aaKnown RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 G6PDP11413 515 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 GALNSP34059 522 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 CLCN2P51788 898 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 AP2B1P63010 937 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 ZNF267Q14586 743 aaPredicted RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 LTB4RQ15722 352 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 CEBPEQ15744 281 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 SPRED3Q2MJR0 410 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 AGAP7PQ5VUJ5 663 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 NXNQ6DKJ4 435 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 H3F3CQ6NXT2 135 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 FAM111BQ6SJ93 734 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 EPGNQ6UW88 154 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 LINC00696Q6ZRV3 163 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 CCDC116Q8IYX3 515 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 LRRC34Q8IZ02 419 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 LRRC25Q8N386 305 aaPredicted RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 OR1N1Q8NGS0 311 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 C9orf43Q8TAL5 461 aaPredicted RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 NUDT8Q8WV74 236 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 THOC1Q96FV9 657 aaKnown RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 SENP5Q96HI0 755 aaPredicted RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 MAELQ96JY0 434 aaKnown RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 AGAP4Q96P64 663 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 BBC3Q96PG8 261 aaPredicted RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 OR52B2Q96RD2 323 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 NPAS2Q99743 824 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 CNPPD1Q9BV87 410 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 BRINP2Q9C0B6 783 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 CXorf21Q9HAI6 301 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 GIMAP4Q9NUV9 329 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 TAS2R7Q9NYW3 318 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 ERVK-19Q9WJR5 959 aa11.84□□□□□ -0.51
TSPAN9-207ENST00000539631 GABRR3A8MPY1 467 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 MYO1GB0I1T2 1018 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 SCAMP2O15127 329 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 DYRK3O43781 588 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 MAN1A2O60476 641 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 KLHL41O60662 606 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 TBX19O60806 448 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 CLPSP04118 112 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ATP1B1P05026 303 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 SOX18P35713 384 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 SOX11P35716 441 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 MDH1P40925 334 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ST13P50502 369 aaKnown RBP11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 MGAT2Q10469 447 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 PDE7AQ13946 482 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 MPEG1Q2M385 716 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 PRICKLE4Q2TBC4 344 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 LACTB2Q53H82 288 aaPredicted RBP11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 CRB2Q5IJ48 1285 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 OGFOD2Q6N063 350 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 TCTN3Q6NUS6 607 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 ISLR2Q6UXK2 745 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 SPATA19Q7Z5L4 167 aa11.83□□□□□ -0.52
TSPAN9-207ENST00000539631 GALNT12Q8IXK2 581 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms