RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 AP5M1Q9H0R1 490 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 KCNN2Q9H2S1 579 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 EVA1BQ9NVM1 165 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ZSCAN32Q9NX65 697 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 TVP23BQ9NYZ1 205 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ADAM30Q9UKF2 790 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 EXO1Q9UQ84 846 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 FCF1Q9Y324 198 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 H0YIV9 168 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 FAAHO00519 579 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 SLC16A5O15375 505 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 B4GALT3O60512 393 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ATF4P18848 351 aaPredicted RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ELAVL4P26378 380 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 AVPR1BP47901 424 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ADAM15Q13444 863 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 DOC2AQ14183 400 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 GRK1Q15835 563 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 CDKN3Q16667 212 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 CLLU1Q5K131 121 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 OR2G6Q5TZ20 316 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 MFSD14CQ5VZR4 134 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 MZT2AQ6P582 158 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 C16orf59Q7L2K0 433 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 CBARPQ8N350 705 aaPredicted RBP17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 ZDHHC3Q9NYG2 299 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 GULP1Q9UBP9 304 aa17.67■□□□□ 0.42
SFSWAP-207ENST00000538548 PIPSLA2A3N6 862 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 GFYI3L273 518 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 PRKYO43930 277 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 MPC1LP0DKB6 136 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 TIA1P31483 386 aaKnown RBP eCLIP17.66■□□□□ 0.421e-7■□□□□ 8.4
SFSWAP-207ENST00000538548 CHI3L1P36222 383 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 ATP5C1P36542 298 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 ALDH6A1Q02252 535 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 POU4F3Q15319 338 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 AANATQ16613 207 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SLC5A12Q1EHB4 618 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 APOBEC4Q8WW27 367 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SORCS2Q96PQ0 1159 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 NINQ8N4C6 2090 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 TRDV1A0A1B0GX56 115 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 RPS10-NUDT3A0A1W2PQS6 291 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 LRRTM2O43300 516 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SH3BGRLO75368 114 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SOD1P00441 154 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SRPRAP08240 638 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 CFL1P23528 166 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 HNF1BP35680 557 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 CTBP2P56545 445 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 MAP2K5Q13163 448 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 IRF5Q13568 498 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SNAPC1Q16533 368 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 CCSAPQ6IQ19 270 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 TPGS1Q6ZTW0 290 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SLC30A8Q8IWU4 369 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 GATAD2BQ8WXI9 593 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 SEPT5Q99719 369 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 REEP4Q9H6H4 257 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 CWH43Q9H720 699 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 TAS2R7Q9NYW3 318 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF224Q9NZL3 707 aa17.66■□□□□ 0.42
SFSWAP-207ENST00000538548 E7EQ34 232 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 IFNA7P01567 189 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 IL32P24001 234 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 STOMP27105 288 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 B4GALNT1Q00973 533 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 SNTA1Q13424 505 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 GALEQ14376 348 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 GPR176Q14439 515 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 CCDC85BQ15834 202 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 DUSP6Q16828 381 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 CTXN3Q4LDR2 81 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 PLA1AQ53H76 456 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 GRHL2Q6ISB3 625 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 BRAT1Q6PJG6 821 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 PLEKHM3Q6ZWE6 761 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 VRK3Q8IV63 474 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 GPR156Q8NFN8 814 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 SENP5Q96HI0 755 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 LRR1Q96L50 414 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 ADAM2Q99965 735 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 SGK2Q9HBY8 427 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 C7orf66A4D0T2 115 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 MYADML2A6NDP7 307 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 LZTS3O60299 673 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 TPPPO94811 219 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 DHFRP00374 187 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 OR56A5P0C7T3 313 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 ANXA3P12429 323 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 LRRC32Q14392 662 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 MORN1Q5T089 497 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 BCL2L15Q5TBC7 163 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 PGBD2Q6P3X8 592 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 USP45Q70EL2 814 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 ADGRF3Q8IZF5 1079 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 IQCF1Q8N6M8 205 aa17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 CELF5Q8N6W0 485 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF655Q8N720 491 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-207ENST00000538548 DNAJC5GQ8N7S2 189 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms