RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 TIGD2Q4W5G0 525 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 ANXA8L1Q5VT79 327 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 FAM91A1Q658Y4 838 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 NACC2Q96BF6 587 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 RBM18Q96H35 190 aaKnown RBP22.69■■□□□ 1.22
HMGA2-208ENST00000537429 AMDHD1Q96NU7 426 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 DGAT2Q96PD7 388 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 MESP1Q9BRJ9 268 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 PELOQ9BRX2 385 aaKnown RBP22.69■■□□□ 1.22
HMGA2-208ENST00000537429 HS3ST3B1Q9Y662 390 aa22.69■■□□□ 1.22
HMGA2-208ENST00000537429 LOC102723996A0A087X1L8 192 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 PRSS51A0A1B0GVH4 220 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 A0A1W2PRB8 838 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 CREG1O75629 220 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 PLIN5Q00G26 463 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 VPS26BQ4G0F5 336 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 MSANTD1Q6ZTZ1 278 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 VPS37AQ8NEZ2 397 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 PPWD1Q96BP3 646 aaKnown RBP22.68■■□□□ 1.22
HMGA2-208ENST00000537429 DPH1Q9BZG8 443 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 FRYQ5TBA9 3013 aa22.68■■□□□ 1.22
HMGA2-208ENST00000537429 A0A1W2PP18 115 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 ASPDHA6ND91 283 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 C1QTNF9BB2RNN3 333 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 CFLARO15519 480 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 OR10H2O60403 315 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 IFNA16P05015 189 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 C1QTNF9P0C862 333 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 EFNA1P20827 205 aaPredicted RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 GALNSP34059 522 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 NCBP2P52298 156 aaKnown RBP eCLIP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 MANFP55145 182 aaKnown RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 SRSF6Q13247 344 aaKnown RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 TLR1Q15399 786 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 MAPRE2Q15555 327 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 DGAT2L6Q6ZPD8 337 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 ADAP2Q9NPF8 381 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 C19orf25Q9UFG5 118 aaPredicted RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 LOC100653049A0A140TA62 436 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 KRT34O76011 436 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 OTX2P32243 289 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 OR4D2P58180 307 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 IL10RAQ13651 578 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 ELAVL1Q15717 326 aaKnown RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 UNQ6494/PRO21346Q6UXR6 183 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 ZNF551Q7Z340 670 aaPredicted RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 CPEB2Q7Z5Q1 589 aaKnown RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 ANKRD46Q86W74 232 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 CLECL1Q8IZS7 167 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 ZFP28Q8NHY6 868 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 RP9Q8TA86 221 aaKnown RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 OR5P2Q8WZ92 322 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 C8orf44Q96CB5 159 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 SLC25A23Q9BV35 468 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 PNO1Q9NRX1 252 aaKnown RBP22.67■■□□□ 1.22
HMGA2-208ENST00000537429 BTNL2Q9UIR0 455 aa22.67■■□□□ 1.22
HMGA2-208ENST00000537429 C6orf47O95873 294 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 NT5EP21589 574 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 LRRC74AQ0VAA2 488 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 LTB4RQ15722 352 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 MAPKAPK3Q16644 382 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 PRICKLE4Q2TBC4 344 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 SFT2D3Q587I9 215 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 KIRREL2Q6UWL6 708 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 TRPM8Q7Z2W7 1104 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 PPP1R32Q7Z5V6 425 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 SNX32Q86XE0 403 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 OR9A2Q8NGT5 310 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 ADAMTS17Q8TE56 1095 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 PTPMT1Q8WUK0 201 aaPredicted RBP22.66■■□□□ 1.22
HMGA2-208ENST00000537429 CCDC115Q96NT0 180 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 DCBLD2Q96PD2 775 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 WDR77Q9BQA1 342 aaPredicted RBP22.66■■□□□ 1.22
HMGA2-208ENST00000537429 CXorf21Q9HAI6 301 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 SERHLQ9NQF3 203 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 ERVK-11Q9UQG0 969 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 NDUFAF1Q9Y375 327 aa22.66■■□□□ 1.22
HMGA2-208ENST00000537429 A0A1W2PQ72 361 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 SOCS6O14544 535 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 RRP8O43159 456 aaKnown RBP22.65■■□□□ 1.22
HMGA2-208ENST00000537429 PTGER1P34995 402 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 SOX18P35713 384 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 HBA1P69905 142 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 HSPB3Q12988 150 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 CYLC2Q14093 348 aaPredicted RBP22.65■■□□□ 1.22
HMGA2-208ENST00000537429 TERF2Q15554 542 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 ADCY4Q8NFM4 1077 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 GTF2H4Q92759 462 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 RIT1Q92963 219 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 RMND5AQ9H871 391 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 SSUH2Q9Y2M2 353 aa22.65■■□□□ 1.22
HMGA2-208ENST00000537429 IGHV3-20A0A0C4DH32 117 aa22.64■■□□□ 1.21
HMGA2-208ENST00000537429 A8MUA0 341 aa22.64■■□□□ 1.21
HMGA2-208ENST00000537429 COX4I1P13073 169 aa22.64■■□□□ 1.21
HMGA2-208ENST00000537429 TNNI3P19429 210 aa22.64■■□□□ 1.21
HMGA2-208ENST00000537429 WT1P19544 449 aaPredicted RBP22.64■■□□□ 1.21
HMGA2-208ENST00000537429 PRDX6P30041 224 aa22.64■■□□□ 1.21
HMGA2-208ENST00000537429 EIF2S3P41091 472 aaKnown RBP22.64■■□□□ 1.21
HMGA2-208ENST00000537429 MGAT2Q10469 447 aa22.64■■□□□ 1.21
HMGA2-208ENST00000537429 MAP4K2Q12851 820 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms