RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 P2RX2Q9UBL9 471 aa15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 LSM2Q9Y333 95 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-202ENST00000535997 A0A1W2PRQ8 180 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC28A2O43868 658 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 SOX14O95416 240 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 DLGAP3O95886 979 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 DRD2P14416 443 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 ENDOUP21128 410 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 PSMA1P25786 263 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 CTNNB1P35222 781 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 DEFA1P59665 94 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 DEFA3P59666 94 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 ALDH6A1Q02252 535 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 TARDBPQ13148 414 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 SELENBP1Q13228 472 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 TP53BP2Q13625 1128 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 CD300LDQ6UXZ3 194 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 MMAAQ8IVH4 418 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 LINC00471Q8N535 108 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 PROKR2Q8NFJ6 384 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 OR4D11Q8NGI4 311 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 EFHD2Q96C19 240 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 ZSCAN32Q9NX65 697 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 EHD3Q9NZN3 535 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 NUP210Q8TEM1 1887 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 A0A1W2PPV9 198 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 SNPHO15079 494 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 NDUFS4O43181 175 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 OR1F1O43749 312 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 NFATC1O95644 943 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 TIE1P35590 1138 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 FEN1P39748 380 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 P2RY2P41231 377 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 VIPR2P41587 438 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC25A30Q5SVS4 291 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 MFSD4BQ5TF39 518 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 FAM46CQ5VWP2 391 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 OR4C11Q6IEV9 310 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 UBE3DQ7Z6J8 389 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC34A3Q8N130 599 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 CLIP4Q8N3C7 705 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 VANGL1Q8TAA9 524 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 ABHD8Q96I13 439 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 NRTNQ99748 197 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 MND1Q9BWT6 205 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 A4GNTQ9UNA3 340 aa15.18■□□□□ 0.02
CHMP1A-202ENST00000535997 HEATR5BQ9P2D3 2071 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 PDZK1P1A8MUH7 402 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 HEPACAM2A8MVW5 462 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 C1QTNF3-AMACRE9PGA6 284 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 CTDSP2O14595 271 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 UGT2B17O75795 530 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 KCNK2O95069 426 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 IGFBP1P08833 259 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 OR12D1P0DN82 309 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 PPP2R1BP30154 601 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 CDK3Q00526 305 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 PIN1Q13526 163 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 SYPL1Q16563 259 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 FAM26EQ8N5C1 309 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 NANOGP1Q8N7R0 232 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 XAGE5Q8WWM1 108 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 ZNF707Q96C28 371 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 WFDC6Q9BQY6 131 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 SLC30A2Q9BRI3 323 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 CCDC32Q9BV29 185 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 SPATA5L1Q9BVQ7 753 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 SERHL2Q9H4I8 314 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 TEX10Q9NXF1 929 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 DNAJC27Q9NZQ0 273 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 SEC14L4Q9UDX3 406 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 CLEC2DQ9UHP7 191 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 SNX11Q9Y5W9 270 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 PRAMEF27A3QJZ7 478 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 OTOL1A6NHN0 477 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 CLEC3AO75596 197 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 NR2F1P10589 423 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 PSMB5P28074 263 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 TPTEP56180 551 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 DOC2BQ14184 412 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 NDUFA9Q16795 377 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 GAB4Q2WGN9 574 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 RAB42Q8N4Z0 105 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 TCEANCQ8N8B7 351 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 GALNT6Q8NCL4 622 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 ST13P5Q8NFI4 369 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 SUSD6Q92537 303 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 CEP19Q96LK0 163 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 CNPPD1Q9BV87 410 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 LGR4Q9BXB1 951 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 ASPNQ9BXN1 380 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 OR51I1Q9H343 314 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 TM7SF3Q9NS93 570 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 KLHL3Q9UH77 587 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 ACSL5Q9ULC5 683 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 TRAPPC4Q9Y296 219 aa15.17■□□□□ 0.02
CHMP1A-202ENST00000535997 LCMT2O60294 686 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-202ENST00000535997 CSO75390 466 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms