RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GLSO94925 669 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 KLHL2O95198 593 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 SNX4O95219 450 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 WISP3O95389 354 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 IL2RAP01589 272 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 FAM58BPP0C7Q3 252 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 SLC35E2P0CK97 266 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 CD22P20273 847 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 UQCRC1P31930 480 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 PIGAP37287 484 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 PPP2R2AP63151 447 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 RPS6KA2Q15349 733 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 SPRED3Q2MJR0 410 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 TSNAXIP1Q2TAA8 658 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 LGSNQ5TDP6 509 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 SCIMPQ6UWF3 145 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 CHERPQ8IWX8 916 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 DMRTC2Q8IXT2 367 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 FBXO25Q8TCJ0 367 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 PAQR8Q8TEZ7 354 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 KCTD4Q8WVF5 259 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 ANKRD9Q96BM1 317 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 NXNL1Q96CM4 212 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 ATOH8Q96SQ7 321 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 MCMBPQ9BTE3 642 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 FOXD3Q9UJU5 478 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 TSC22D4Q9Y3Q8 395 aa12.22□□□□□ -0.45
CLSTN3-205ENST00000535452 TMEM200CA6NKL6 621 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 AHRRA9YTQ3 701 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 FOXE1O00358 373 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 PLPP1O14494 284 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 PROM1O43490 865 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 KLK8O60259 260 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 KRT38O76015 456 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 TOXO94900 526 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 SEMA3DO95025 777 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 C2P06681 752 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 FBXO45P0C2W1 286 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 GLI4P10075 376 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 NT5EP21589 574 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 GALNSP34059 522 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 KIR2DL3P43628 341 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 IGLV3-21P80748 117 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 PCDH1Q08174 1060 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 RCAN2Q14206 197 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 CDSNQ15517 529 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 CCNYL2Q5T2Q4 361 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 RIPPLY2Q5TAB7 128 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 C18orf63Q68DL7 685 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 UBE3DQ7Z6J8 389 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 C9orf40Q8IXQ3 194 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 ZNF321PQ8N8H1 164 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 OR4K14Q8NGD5 310 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 TP53INP1Q96A56 240 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 FAIM2Q9BWQ8 316 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 WWTR1Q9GZV5 400 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 ACKR4Q9NPB9 350 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 PFDN4Q9NQP4 134 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 IGSF5Q9NSI5 407 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 PSD3Q9NYI0 1048 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 CLDN16Q9Y5I7 305 aa12.21□□□□□ -0.45
CLSTN3-205ENST00000535452 GLOD5A6NK44 160 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 FAM155BO75949 473 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 ESRRBO95718 433 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 TBX6O95947 436 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 KRT20P35900 424 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 SERPINB9P50453 376 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 NR0B1P51843 470 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 ART1P52961 327 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 MAPK12P53778 367 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 GPX6P59796 221 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 E2F2Q14209 437 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 PCBP2Q15366 365 aaKnown RBP eCLIP12.2□□□□□ -0.469e-7■■■■□ 24.1
CLSTN3-205ENST00000535452 ZNF791Q3KP31 576 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 ARSKQ6UWY0 536 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 GOLGA7Q7Z5G4 137 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 KIF18BQ86Y91 864 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 MARVELD2Q8N4S9 558 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 OR7G1Q8NGA0 311 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 RMND5BQ96G75 393 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 SECISBP2Q96T21 854 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 SORBS1Q9BX66 1292 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 POLDIP3Q9BY77 421 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 BRINP2Q9C0B6 783 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 ZNF703Q9H7S9 590 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 NOL11Q9H8H0 719 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 DDX31Q9H8H2 851 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 METTL7AQ9H8H3 244 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 DNAJB12Q9NXW2 375 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 GRHL1Q9NZI5 618 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 SNX6Q9UNH7 406 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 ZNF780BQ9Y6R6 833 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 GTF3C1Q12789 2109 aa12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 NCOA6Q14686 2063 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-205ENST00000535452 A0A0G2JMM0 328 aa12.19□□□□□ -0.46
CLSTN3-205ENST00000535452 A0A1W2PPB8 328 aa12.19□□□□□ -0.46
CLSTN3-205ENST00000535452 A0A1W2PRS3 328 aa12.19□□□□□ -0.46
CLSTN3-205ENST00000535452 CCDC151A5D8V7 595 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms