RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 C14orf28Q4W4Y0 310 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 GLRA4Q5JXX5 417 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 DCAF12Q5T6F0 453 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 PAMR1Q6UXH9 720 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 SIAH3Q8IW03 269 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 CLYBLQ8N0X4 340 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 PARP8Q8N3A8 854 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 TMCO5AQ8N6Q1 288 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 MSANTD4Q8NCY6 345 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 FBXO25Q8TCJ0 367 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 TEKT1Q969V4 418 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 AP2M1Q96CW1 435 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 NTNG2Q96CW9 530 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 GUCD1Q96NT3 240 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 RANBP9Q96S59 729 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 ZNF350Q9GZX5 532 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 IL1RAPL2Q9NP60 686 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 GDF3Q9NR23 364 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 DNAJC17Q9NVM6 304 aaKnown RBP3.72□□□□□ -1.81
PRKDC-205ENST00000535375 TAS2R16Q9NYV7 291 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 RCOR3Q9P2K3 495 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-205ENST00000535375 PSORS1C1Q9UIG5 152 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 SNX5Q9Y5X3 404 aa3.72□□□□□ -1.81
PRKDC-205ENST00000535375 FAM205AQ6ZU69 1335 aa3.71□□□□□ -1.81
PRKDC-205ENST00000535375 H0YIG0 161 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 EPOP01588 193 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 MMP10P09238 476 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 CCDC159P0C7I6 412 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 ASIC1P78348 528 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 GSG1Q2KHT4 349 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 Q6ZRG5 221 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 CCDC91Q7Z6B0 441 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 ASPGQ86U10 573 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 CCDC83Q8IWF9 413 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 UNC45BQ8IWX7 931 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 SYCP3Q8IZU3 236 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF491Q8N8L2 437 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 S1PR3Q99500 378 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 AGPAT1Q99943 283 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 RNF41Q9H4P4 317 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-205ENST00000535375 IL1RL2Q9HB29 575 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF275Q9NSD4 429 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-205ENST00000535375 ABCB8Q9NUT2 735 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 CNIH4Q9P003 139 aa3.71□□□□□ -1.82
PRKDC-205ENST00000535375 SLC33A1O00400 549 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-205ENST00000535375 NME6O75414 186 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-205ENST00000535375 CHRNA3P32297 505 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 MTIF2P46199 727 aaKnown RBP3.7□□□□□ -1.82
PRKDC-205ENST00000535375 KCNK10P57789 538 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 HEPACAMQ14CZ8 416 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 P2RY14Q15391 338 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 OR1C1Q15619 314 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 PPP1R3AQ16821 1122 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 SMU1Q2TAY7 513 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 WSCD2Q2TBF2 565 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF789Q5FWF6 425 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 VASH2Q86V25 355 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 GTSF1Q8WW33 167 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 SIGLEC12Q96PQ1 595 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 SPAG8Q99932 426 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-205ENST00000535375 TEX13BQ9BXU2 312 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 MMADHCQ9H3L0 296 aaPredicted RBP3.7□□□□□ -1.82
PRKDC-205ENST00000535375 CLIP2Q9UDT6 1046 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 EXOC7Q9UPT5 735 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 KCNK6Q9Y257 313 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 ATRXP46100 2492 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 RPGRIP1LQ68CZ1 1315 aa3.7□□□□□ -1.82
PRKDC-205ENST00000535375 LRRD1A4D1F6 860 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 TRIM64A6NGJ6 449 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 TRIM64BA6NI03 449 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF263O14978 683 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 TTI1O43156 1089 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 KINO60870 393 aaKnown RBP3.69□□□□□ -1.82
PRKDC-205ENST00000535375 PRAMEF12O95522 483 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 MBL2P11226 248 aaPredicted RBP3.69□□□□□ -1.82
PRKDC-205ENST00000535375 ZBTB25P24278 435 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 STIP1P31948 543 aaKnown RBP3.69□□□□□ -1.82
PRKDC-205ENST00000535375 CASP3P42574 277 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 SLC7A2P52569 658 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 LCP2Q13094 533 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 PPP2R5CQ13362 524 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 TRADDQ15628 312 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF79Q15937 498 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 UNC50Q53HI1 259 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 WDR25Q64LD2 544 aaPredicted RBP3.69□□□□□ -1.82
PRKDC-205ENST00000535375 KRTAP11-1Q8IUC1 163 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 TMEM126BQ8IUX1 230 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 WDR49Q8IV35 697 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 LAX1Q8IWV1 398 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 C10orf53Q8N6V4 93 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 ZNF525Q8N782 197 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 CHDHQ8NE62 594 aaPredicted RBP3.69□□□□□ -1.82
PRKDC-205ENST00000535375 VN1R17PQ8TDU5 208 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 PHYHIPLQ96FC7 376 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 CABS1Q96KC9 395 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 PANX3Q96QZ0 392 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 NUSAP1Q9BXS6 441 aaKnown RBP3.69□□□□□ -1.82
PRKDC-205ENST00000535375 DEFB126Q9BYW3 111 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 CXXC4Q9H2H0 198 aa3.69□□□□□ -1.82
PRKDC-205ENST00000535375 ZDHHC6Q9H6R6 413 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms