RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 UCN3Q969E3 161 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 KCNA7Q96RP8 456 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 CNPPD1Q9BV87 410 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 TMEM109Q9BVC6 243 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 FAIM2Q9BWQ8 316 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 C12orf65Q9H3J6 166 aaKnown RBP12.8□□□□□ -0.36
TMEM258-203ENST00000535297 LIN28AQ9H9Z2 209 aaKnown RBP12.8□□□□□ -0.36
TMEM258-203ENST00000535297 ERRFI1Q9UJM3 462 aaPredicted RBP12.8□□□□□ -0.36
TMEM258-203ENST00000535297 ERVK-11Q9UQG0 969 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 ERVK-19Q9WJR5 959 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 OSGIN2Q9Y236 505 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 PLLPQ9Y342 182 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 TIMM22Q9Y584 194 aa12.8□□□□□ -0.36
TMEM258-203ENST00000535297 GOLGA6L10A6NI86 522 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 OR6C76A6NM76 312 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 KLRC4-KLRK1H3BQV0 150 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 HRKO00198 91 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 PCDH7O60245 1069 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 OR6B1O95007 311 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 UNC5CO95185 931 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 CPMP14384 443 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 CHN1P15882 459 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 ZNF24P17028 368 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 SOX3P41225 446 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 MEOX1P50221 254 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 KCNK10P57789 538 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 HMGCS1Q01581 520 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 ACSM2AQ08AH3 577 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 ASPHQ12797 758 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 ZNF267Q14586 743 aaPredicted RBP12.79□□□□□ -0.36
TMEM258-203ENST00000535297 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.79□□□□□ -0.36
TMEM258-203ENST00000535297 C4orf17Q53FE4 359 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 KRTCAP3Q53RY4 240 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 C6orf163Q5TEZ5 329 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 ACSM2BQ68CK6 577 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 OPN5Q6U736 354 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 RNF111Q6ZNA4 994 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 SLC29A4Q7RTT9 530 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 SIAH3Q8IW03 269 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 SRRM1Q8IYB3 904 aaKnown RBP12.79□□□□□ -0.36
TMEM258-203ENST00000535297 CPSF7Q8N684 471 aaKnown RBP12.79□□□□□ -0.36
TMEM258-203ENST00000535297 PSD4Q8NDX1 1056 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 SLC22A8Q8TCC7 542 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 TM4SF18Q96CE8 201 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 GPR137Q96N19 417 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 PSMG3-AS1Q96PY0 264 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 TRMOQ9BU70 441 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 PARD6BQ9BYG5 372 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 CXorf21Q9HAI6 301 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 CES1P1Q9UKY3 287 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 RAB21Q9UL25 225 aa12.79□□□□□ -0.36
TMEM258-203ENST00000535297 A0A1W2PS29 197 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 PEX1O43933 1283 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 CRCPO75575 148 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 LDLRP01130 860 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 TUBBP07437 444 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 PORP16435 677 aaPredicted RBP12.78□□□□□ -0.36
TMEM258-203ENST00000535297 TIA1P31483 386 aaKnown RBP eCLIP12.78□□□□□ -0.361e-42■■■■■ 29.7
TMEM258-203ENST00000535297 DEKP35659 375 aaKnown RBP12.78□□□□□ -0.36
TMEM258-203ENST00000535297 GSTM5P46439 218 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 XKP51811 444 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 FOXA1P55317 472 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 PER3P56645 1201 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 SLC37A1P57057 533 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
TMEM258-203ENST00000535297 RBPJQ06330 500 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 EBPQ15125 230 aaKnown RBP12.78□□□□□ -0.36
TMEM258-203ENST00000535297 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 GALNT18Q6P9A2 607 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 IL20RBQ6UXL0 311 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 RTL4Q6ZR62 310 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 MDGA2Q7Z553 956 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 C10orf107Q8IVU9 208 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 SLC15A4Q8N697 577 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 SREK1Q8WXA9 508 aaKnown RBP12.78□□□□□ -0.36
TMEM258-203ENST00000535297 KLHL29Q96CT2 875 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 C11orf24Q96F05 449 aaPredicted RBP12.78□□□□□ -0.36
TMEM258-203ENST00000535297 SGCZQ96LD1 299 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 SIRT5Q9NXA8 310 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 PSME2Q9UL46 239 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 DIDO1Q9BTC0 2240 aaKnown RBP12.78□□□□□ -0.36
TMEM258-203ENST00000535297 ICE1Q9Y2F5 2266 aa12.78□□□□□ -0.36
TMEM258-203ENST00000535297 A0A1B0GUH1 482 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 GNG14A0A1W2PPG7 69 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 WIPF3A6NGB9 483 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 NPIPA5E9PKD4 350 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 TRIM13O60858 407 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 CLPSP04118 112 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 ATP1B1P05026 303 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 RNF224P0DH78 156 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 UROSP10746 265 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 DRD2P14416 443 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 CSNK2A2P19784 350 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-203ENST00000535297 NT5EP21589 574 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
TMEM258-203ENST00000535297 FUT7Q11130 342 aa12.77□□□□□ -0.37
TMEM258-203ENST00000535297 IMPG1Q17R60 797 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms