RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	HHATL	Q9HCP6	504 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	XAB2	Q9HCS7	855 aa	Known RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PRSS16	Q9NQE7	514 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ABCF3	Q9NUQ8	709 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TMEM30A	Q9NV96	361 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	DNAJB9	Q9UBS3	223 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC24A2	Q9UI40	661 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MYO6	Q9UM54	1294 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MEMO1	Q9Y316	297 aa		4.12	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TRAV34	A0A0B4J273	112 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IGHV5-10-1	A0A0J9YXX1	117 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SMIM28	A0A1B0GU29	152 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PRSS51	A0A1B0GVH4	220 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RNF103	O00237	685 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC19A2	O60779	497 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NOL4	O94818	638 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GCNT3	O95395	438 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CRYAB	P02511	175 aa	Known RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	VDR	P11473	427 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MYOD1	P15172	320 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TSFM	P43897	325 aa	Known RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PNRC1	Q12796	327 aa	Predicted RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	HSPB3	Q12988	150 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C1orf61	Q13536	156 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NR1D2	Q14995	579 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR6B2	Q6IFH4	312 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RAD9B	Q6WBX8	426 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TPGS1	Q6ZTW0	290 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ANO5	Q75V66	913 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ADCK2	Q7Z695	626 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CEP57L1	Q8IYX8	460 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TTC30B	Q8N4P2	665 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C1orf52	Q8N6N3	182 aa	Known RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	IQUB	Q8NA54	791 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PAPD5	Q8NDF8	572 aa	Known RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR10T2	Q8NGX3	314 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SETD6	Q8TBK2	473 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC20A1	Q8WUM9	679 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SMPDL3B	Q92485	455 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FAM162A	Q96A26	154 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	VOPP1	Q96AW1	172 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CCDC127	Q96BQ5	260 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SPDL1	Q96EA4	605 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SPAG5	Q96R06	1193 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OMD	Q99983	421 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MGME1	Q9BQP7	344 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SF3B5	Q9BWJ5	86 aa	Known RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SPZ1	Q9BXG8	430 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NFKBIZ	Q9BYH8	718 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	WNT5B	Q9H1J7	359 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	DHX33	Q9H6R0	707 aa	Known RBP	4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OSER1	Q9NX31	292 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	BARHL2	Q9NY43	387 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NPAP1	Q9NZP6	1156 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CYTH4	Q9UIA0	394 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SCML1	Q9UN30	329 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	L3MBTL1	Q9Y468	752 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	POMT1	Q9Y6A1	747 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MUC2	Q02817	5179 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TRIP11	Q15643	1979 aa		4.11	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C5orf60	A6NFR6	353 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LILRA5	A6NI73	299 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	OR6C76	A6NM76	312 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ANXA2P2	A6NMY6	339 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZNF587B	E7ETH6	402 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LMO7DN	F2Z398	122 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TMEM178B	H3BS89	294 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CLIC2	O15247	247 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TCF21	O43680	179 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	DNAJB6	O75190	326 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TOX	O94900	526 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ALPP	P05187	535 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	NUDT1	P36639	197 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MFAP3	P55082	362 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ISL1	P61371	349 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RPS18	P62269	152 aa	Known RBP	4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SPAG1	Q07617	926 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SLC20A2	Q08357	652 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	MZT1	Q08AG7	82 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SMARCB1	Q12824	385 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	TUBB2A	Q13885	445 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	FZD2	Q14332	565 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	GCNT6	Q5T4J0	391 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	KRT39	Q6A163	491 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	DPY19L2P1	Q6NXN4	242 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	PET117	Q6UWS5	81 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	CEACAM20	Q6UY09	585 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ZBTB49	Q6ZSB9	765 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C1QL2	Q7Z5L3	287 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SATL1	Q86VE3	508 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	ODF3L1	Q8IXM7	274 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	LIX1	Q8N485	282 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	BMPER	Q8N8U9	685 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	KIAA0895	Q8NCT3	520 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	RDM1	Q8NG50	284 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	SPPL2B	Q8TCT7	592 aa		4.1	□□□□□ -1.75
ECHDC1-223	ENST00000534442	C2orf15	Q8WU43	125 aa	Known RBP	4.1	□□□□□ -1.75

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