RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ZNF441Q8N8Z8 693 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 GOLM1Q8NBJ4 401 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 FAM98AQ8NCA5 519 aaKnown RBP9.13□□□□□ -0.95
NUP98-220ENST00000533346 OR7G1Q8NGA0 311 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 TCP10LQ8TDR4 215 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 RIT1Q92963 219 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 ERP27Q96DN0 273 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 PGM2Q96G03 612 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 ZNF764Q96H86 408 aaPredicted RBP9.13□□□□□ -0.95
NUP98-220ENST00000533346 FCRL1Q96LA6 429 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 SGCZQ96LD1 299 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 RASL10BQ96S79 203 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 FAIM2Q9BWQ8 316 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 IQCGQ9H095 443 aaKnown RBP9.13□□□□□ -0.95
NUP98-220ENST00000533346 CXorf21Q9HAI6 301 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 OLAHQ9NV23 265 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 COPS7AQ9UBW8 275 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 TIMM22Q9Y584 194 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 POLEQ07864 2286 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 DOPEY2Q9Y3R5 2298 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 EXPH5Q8NEV8 1989 aa9.13□□□□□ -0.95
NUP98-220ENST00000533346 GOLGA6L10A6NI86 522 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 SMIM23A6NLE4 172 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 WASHC1A8K0Z3 465 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 KLRC4-KLRK1H3BQV0 150 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 PRKRAO75569 313 aaKnown RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 SLC25A12O75746 678 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 SNUPNO95149 360 aaKnown RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 GBAP04062 536 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 STSP08842 583 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 DHRS4L1P0CG22 281 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 CPMP14384 443 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 CHN1P15882 459 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 PORP16435 677 aaPredicted RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 CSNK2A2P19784 350 aaPredicted RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 S1PR1P21453 382 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 ALDH3A1P30838 453 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 TIA1P31483 386 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUP98-220ENST00000533346 SOX18P35713 384 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 UQCRFS1P47985 274 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 XKP51811 444 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 MGAT2Q10469 447 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 HEPACAMQ14CZ8 416 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 NR6A1Q15406 480 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 HYAL4Q2M3T9 481 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 UGT3A2Q3SY77 523 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 SGO1Q5FBB7 561 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 CFAP157Q5JU67 520 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 KANK2Q63ZY3 851 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 OPN5Q6U736 354 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 LYPD8Q6UX82 237 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 EXOC3L1Q86VI1 746 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 SIAH3Q8IW03 269 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 C9orf40Q8IXQ3 194 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 CLYBLQ8N0X4 340 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 TMEM156Q8N614 296 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 CCNYL1Q8N7R7 359 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 ZNF321PQ8N8H1 164 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 ZNF615Q8N8J6 731 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 CCDC63Q8NA47 563 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 ZFP62Q8NB50 900 aaPredicted RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 ZNF675Q8TD23 568 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 UCN3Q969E3 161 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 PPWD1Q96BP3 646 aaKnown RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 NTNG2Q96CW9 530 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 APIPQ96GX9 242 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 C5orf34Q96MH7 638 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 FRMD6Q96NE9 622 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 KCNA7Q96RP8 456 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 CCT7Q99832 543 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 OR8D2Q9GZM6 311 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 C12orf65Q9H3J6 166 aaKnown RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 SH2D2AQ9NP31 389 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 RRAGDQ9NQL2 400 aaPredicted RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 MAP10Q9P2G4 905 aa9.12□□□□□ -0.95
NUP98-220ENST00000533346 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUP98-220ENST00000533346 KLF13Q9Y2Y9 288 aaPredicted RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 V9GYY5 206 aaPredicted RBP9.12□□□□□ -0.95
NUP98-220ENST00000533346 NBASA2RRP1 2371 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 SLC28A1O00337 649 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 AZIN1O14977 448 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 TM9SF1O15321 606 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 BIRC5O15392 142 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 CTIFO43310 598 aaKnown RBP9.11□□□□□ -0.95
NUP98-220ENST00000533346 PCDH7O60245 1069 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 ZNF354AO60765 605 aaPredicted RBP9.11□□□□□ -0.95
NUP98-220ENST00000533346 TBX19O60806 448 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 OR2J2O76002 312 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 SLITRK5O94991 958 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 NADKO95544 446 aaPredicted RBP9.11□□□□□ -0.95
NUP98-220ENST00000533346 F10P00742 488 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 BPGMP07738 259 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 CREB1P16220 341 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 NAGAP17050 411 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 MST1P26927 711 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 SLC18A1P54219 525 aa9.11□□□□□ -0.95
NUP98-220ENST00000533346 ID2Q02363 134 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms