RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 OR2AG2A6NM03 316 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ST6GAL1P15907 406 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 MSH3P20585 1137 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 CLCN2P51788 898 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ZIK1Q3SY52 487 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 BCL7AQ4VC05 210 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 B3GNT6Q6ZMB0 384 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ZNF551Q7Z340 670 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 PPP1R32Q7Z5V6 425 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 PACRGLQ8N7B6 248 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 TRIML2Q8N7C3 387 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 GOLM1Q8NBJ4 401 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 OR4E2Q8NGC2 313 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 OR10Q1Q8NGQ4 319 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 OR2Y1Q8NGV0 311 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 SLC13A3Q8WWT9 602 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 SGCDQ92629 289 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 EGLN2Q96KS0 407 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 TBCDQ9BTW9 1192 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 C9orf16Q9BUW7 83 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 SRMSQ9H3Y6 488 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 CLK4Q9HAZ1 481 aaKnown RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ATP13A2Q9NQ11 1180 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 NDUFA13Q9P0J0 144 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 PDE10AQ9Y233 779 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 PTRH2Q9Y3E5 179 aaKnown RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 AP1M2Q9Y6Q5 423 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ANKRD17O75179 2603 aaKnown RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 DOCK10Q96BY6 2186 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 GSAPA4D1B5 854 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 TRIM64A6NGJ6 449 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 K7EPI3 171 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 MANBAO00462 879 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ZG16O60844 167 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 S100BP04271 92 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 STSP08842 583 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 CBSLP0DN79 551 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 GGT1P19440 569 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 CBSP35520 551 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 POLR2IP36954 125 aaKnown RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 RGS4P49798 205 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 NAA20P61599 178 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 HSPA14Q0VDF9 509 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 AIMP2Q13155 320 aaKnown RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 PWP1Q13610 501 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 KRT33BQ14525 404 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 MLIPQ5VWP3 458 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 B3GNTL1Q67FW5 361 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 FCRL6Q6DN72 434 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 IGFL2Q6UWQ7 119 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 TRIM46Q7Z4K8 759 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ANKRD46Q86W74 232 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 GPR135Q8IZ08 494 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 FBXO30Q8TB52 745 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 GRHL3Q8TE85 626 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 FIG4Q92562 907 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 LINC00615Q96LM1 132 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 NSMCE2Q96MF7 247 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 INPP5KQ9BT40 448 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ZBTB20Q9HC78 741 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-207ENST00000533242 NDOR1Q9UHB4 597 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 CIDEBQ9UHD4 219 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 TMCO1Q9UM00 188 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 CDC14AQ9UNH5 594 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 ERVK-11Q9UQG0 969 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 PCDHGA11Q9Y5H2 935 aa7.77□□□□□ -1.17
NEDD8-207ENST00000533242 MDC1Q14676 2089 aaKnown RBP7.76□□□□□ -1.17
NEDD8-207ENST00000533242 TRIM64CA6NLI5 447 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 CLOCKO15516 846 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 ULK1O75385 1050 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 SEC22BO75396 215 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 PDYNP01213 254 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 GSNP06396 782 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 PGRP06401 933 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 BCKDHAP12694 445 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 ELK4P28324 431 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 AKT1P31749 480 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 SHMT2P34897 504 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 PTGER4P35408 488 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 CDKN2CP42773 168 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 ADARB1P78563 741 aaKnown RBP7.76□□□□□ -1.17
NEDD8-207ENST00000533242 CYP2A13Q16696 494 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 SPATS1Q496A3 300 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 SULT1C3Q6IMI6 304 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 RHBDD2Q6NTF9 364 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 TTC33Q6PID6 262 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-207ENST00000533242 USP51Q70EK9 711 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 TBC1D21Q8IYX1 336 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 UBTD2Q8WUN7 234 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 LCN9Q8WX39 176 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 TMBIM1Q969X1 311 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 RELTQ969Z4 430 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 NTMT1Q9BV86 223 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 VCX3AQ9NNX9 186 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 SERHLQ9NQF3 203 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 SMPD3Q9NY59 655 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-207ENST00000533242 PPT2Q9UMR5 302 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 ANGPTL3Q9Y5C1 460 aa7.76□□□□□ -1.17
NEDD8-207ENST00000533242 KLF2Q9Y5W3 355 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-207ENST00000533242 SPENQ96T58 3664 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms