RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TSSK6Q9BXA6 273 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 SLC6A17Q9H1V8 727 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 BRD7Q9NPI1 651 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 A0A1W2PRQ8 180 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 ZNF28P17035 718 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 TCN2P20062 427 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 ACSL1P33121 698 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 MAZP56270 477 aaKnown RBP10.78□□□□□ -0.68
PTPRK-221ENST00000532331 HYAL1Q12794 435 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 SLC14A2Q15849 920 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 HSDL2Q6YN16 418 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 CEP97Q8IW35 865 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 SPEM1Q8N4L4 309 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 CXCL16Q9H2A7 254 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 TRIM36Q9NQ86 728 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 PTTG2Q9NZH5 202 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 HS3ST3A1Q9Y663 406 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 ORC5O43913 435 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 AK1P00568 194 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 CD68P34810 354 aaPredicted RBP10.78□□□□□ -0.68
PTPRK-221ENST00000532331 CAPZA1P52907 286 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 OR12D2P58182 307 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 TPRG1LQ5T0D9 272 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 ZFAND4Q86XD8 727 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 CHCHD4Q8N4Q1 142 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 PKP2Q99959 881 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 LHX3Q9UBR4 397 aa10.78□□□□□ -0.68
PTPRK-221ENST00000532331 NSG1A0A0A6YYJ2 146 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 A0A0U1RQS6 177 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 RTCAO00442 366 aaKnown RBP10.77□□□□□ -0.68
PTPRK-221ENST00000532331 PRAMEF2O60811 474 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 SCRG1O75711 98 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 PRSS56P0CW18 603 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 FIP1L1Q6UN15 594 aaKnown RBP10.77□□□□□ -0.68
PTPRK-221ENST00000532331 DNAJA4Q8WW22 397 aaPredicted RBP10.77□□□□□ -0.68
PTPRK-221ENST00000532331 RAB8BQ92930 207 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 ZUFSPQ96AP4 578 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 WDR77Q9BQA1 342 aaPredicted RBP10.77□□□□□ -0.68
PTPRK-221ENST00000532331 B3GNT4Q9C0J1 378 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 TMEM9BQ9NQ34 198 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 MGAT4BQ9UQ53 548 aa10.77□□□□□ -0.68
PTPRK-221ENST00000532331 A0A0A6YYC8 382 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 GJE1A6NN92 205 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 I3L1I5 382 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ACOX3O15254 700 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 FOXD2O60548 495 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 RPP14O95059 124 aaKnown RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 RAB36O95755 333 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 IFI30P13284 250 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 INHBCP55103 352 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 KCNC4Q03721 635 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 CYS1Q717R9 158 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 LARP4Q71RC2 724 aaKnown RBP eCLIP10.77□□□□□ -0.693e-6■■■■□ 21.5
PTPRK-221ENST00000532331 ZNF627Q7L945 461 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 MARCH9Q86YJ5 346 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ZSCAN4Q8NAM6 433 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 TOR1AIP2Q8NFQ8 470 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 C1orf216Q8TAB5 229 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 OSTF1Q92882 214 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 MCHR1Q99705 422 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 SP140LQ9H930 580 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 TCHHQ07283 1943 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 A0A096LPI6 279 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 VSTM2BA6NLU5 285 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 AREL1O15033 823 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 DIRAS1O95057 198 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 CH25HO95992 272 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ALDOAP04075 364 aaKnown RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 CDH11P55287 796 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 COL9A2Q14055 689 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ARL9Q6T311 187 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 OR8J3Q8NGG0 315 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 GNPDA2Q8TDQ7 276 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 PRRX2Q99811 253 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ALOXE3Q9BYJ1 711 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 TMEM168Q9H0V1 697 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ETAA1Q9NY74 926 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 NFS1Q9Y697 457 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 MYH7P12883 1935 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 CDC14CA4D256 554 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 DIO3P55073 304 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 PPP1R8Q12972 351 aaKnown RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 C3orf38Q5JPI3 329 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ATG9BQ674R7 924 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 GTF2IRD2BQ6EKJ0 949 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 KDELC1Q6UW63 502 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 LCTLQ6UWM7 567 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 SHISA6Q6ZSJ9 500 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF554Q86TJ5 538 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 GTF2IRD2Q86UP8 949 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ITPAQ9BY32 194 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 CRISPLD2Q9H0B8 497 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 STARD5Q9NSY2 213 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 MALT1Q9UDY8 824 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 LIPT1Q9Y234 373 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 TLX2O43763 284 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 ENTPD6O75354 484 aa10.77□□□□□ -0.69
PTPRK-221ENST00000532331 EIF1AXP47813 144 aaKnown RBP10.77□□□□□ -0.69
PTPRK-221ENST00000532331 CHAF1BQ13112 559 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms