RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TANKQ92844 425 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 UCN3Q969E3 161 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 ATOH8Q96SQ7 321 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 CLEC4MQ9H2X3 399 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 DMRT3Q9NQL9 472 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 MS4A12Q9NXJ0 267 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 B4GALT7Q9UBV7 327 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 PHF11Q9UIL8 331 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 ST6GALNAC2Q9UJ37 374 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 CNOT11Q9UKZ1 510 aaKnown RBP16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 SAR1BQ9Y6B6 198 aa16.93■□□□□ 0.3
SSSCA1-206ENST00000531405 IQANK1A0A1B0GTG1 560 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 FAM47E-STBD1D6RA91 191 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 EEDO75530 441 aaKnown RBP16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 CLPSP04118 112 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 BMP5P22003 454 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 GDF1P27539 372 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 SERPINB1P30740 379 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 SLC37A1P57057 533 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 GPX6P59796 221 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 GNG11P61952 73 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 RPS13P62277 151 aaKnown RBP16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 EBPQ15125 230 aaKnown RBP16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 KRTAP21-3Q3LHN1 58 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 BICRALQ6AI39 1079 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 C3orf62Q6ZUJ4 267 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 TGIF2LYQ8IUE0 185 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 TEX9Q8N6V9 391 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 TNIP2Q8NFZ5 429 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 NINJ1Q92982 152 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 DOHHQ9BU89 302 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 ZNF717Q9BY31 904 aaPredicted RBP16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 ACKR4Q9NPB9 350 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 IGSF5Q9NSI5 407 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 CNIH4Q9P003 139 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 PLEKHA6Q9Y2H5 1048 aa16.92■□□□□ 0.3
SSSCA1-206ENST00000531405 MED12LQ86YW9 2145 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 C15orf38-AP3S2A0A0A6YYH1 394 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 A0A1W2PS29 197 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 HSPB2A8KAH6 182 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 PROM1O43490 865 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 TMPRSS11DO60235 418 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 OR10H2O60403 315 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 KERAO60938 352 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 GPR75O95800 540 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 EPB42P16452 691 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 SERPINB3P29508 390 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 TLX1P31314 330 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 SPRP35270 261 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 PCDH1Q08174 1060 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 TBL3Q12788 808 aaKnown RBP16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 DUSP8Q13202 625 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 HSPB2Q16082 182 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 NTRK2Q16620 822 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 SPRED3Q2MJR0 410 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 KBTBD12Q3ZCT8 623 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 ACSF3Q4G176 576 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 ZCCHC7Q8N3Z6 543 aaKnown RBP16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 PPM1NQ8N819 430 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 C7orf57Q8NEG2 295 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 DIO2Q92813 273 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 RIT1Q92963 219 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 RMND5BQ96G75 393 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 ZNF597Q96LX8 424 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 NAPGQ99747 312 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 SH3GL2Q99962 352 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 NMRAL1Q9HBL8 299 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 RASSF1Q9NS23 344 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 QPCTLQ9NXS2 382 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 ASB4Q9Y574 426 aa16.91■□□□□ 0.3
SSSCA1-206ENST00000531405 A0A1W2PR48 441 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 LRRC14BA6NHZ5 514 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 SYT5O00445 386 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 TRIM3O75382 744 aaPredicted RBP16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 LTA4HP09960 611 aaKnown RBP16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 MTHFD2P13995 350 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 KLK2P20151 261 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 SSTR4P31391 388 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 BUD31P41223 144 aaPredicted RBP16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 PIK3CBP42338 1070 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 FBXW4P57775 412 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 CRYZQ08257 329 aaKnown RBP16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 CALCOCO2Q13137 446 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 BIKQ13323 160 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 GRTP1Q5TC63 336 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 TBC1D1Q86TI0 1168 aaPredicted RBP16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 DND1Q8IYX4 353 aaKnown RBP16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 CHDHQ8NE62 594 aaPredicted RBP16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 NXNL1Q96CM4 212 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 WHRNQ9P202 907 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 ADGRE2Q9UHX3 823 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 PCDHGB3Q9Y5G1 929 aa16.9■□□□□ 0.3
SSSCA1-206ENST00000531405 A0A0A6YYD5 115 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 FAM221AA4D161 298 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 A6NNC1 897 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 DVL2O14641 736 aa16.89■□□□□ 0.29
SSSCA1-206ENST00000531405 EIF3HO15372 352 aaKnown RBP eCLIP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms