RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 PDLIM3Q53GG5 364 aaPredicted RBP7.46□□□□□ -1.22
CD44-232ENST00000531118 C11orf63Q6NUN7 778 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 VWA1Q6PCB0 445 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 AGTRAPQ6RW13 159 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.46□□□□□ -1.22
CD44-232ENST00000531118 VN1R5Q7Z5H4 357 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 ZNF595Q8IYB9 648 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 DND1Q8IYX4 353 aaKnown RBP7.46□□□□□ -1.22
CD44-232ENST00000531118 TBC1D19Q8N5T2 526 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 OR4K1Q8NGD4 311 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 ZNF721Q8TF20 911 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 UCN3Q969E3 161 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 GAL3ST3Q96A11 431 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 TRMT61AQ96FX7 289 aaKnown RBP7.46□□□□□ -1.22
CD44-232ENST00000531118 QRFPRQ96P65 431 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 G6PC3Q9BUM1 346 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 KLHL31Q9H511 634 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 L2HGDHQ9H9P8 463 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 CHRAC1Q9NRG0 131 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 CNIH4Q9P003 139 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 COPS7AQ9UBW8 275 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 CRYL1Q9Y2S2 319 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 MED16Q9Y2X0 877 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.46□□□□□ -1.22
CD44-232ENST00000531118 IKBKGQ9Y6K9 419 aa7.46□□□□□ -1.22
CD44-232ENST00000531118 A0A0G2JK05 382 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 LRRC14BA6NHZ5 514 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 GOLGA8KD6RF30 607 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 GOLGA8TH3BQL2 631 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 OVOL3O00110 214 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 ACSL3O95573 720 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 F7P08709 466 aaPredicted RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 OGNP20774 298 aaKnown RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 IGFBP5P24593 272 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 NMBRP28336 390 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 CTNNA1P35221 906 aaKnown RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 RPL21P46778 160 aaKnown RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 HADHBP55084 474 aaKnown RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 CRADDP78560 199 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 VLDLRP98155 873 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 CTBP1Q13363 440 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 GAB1Q13480 694 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 NTRK2Q16620 822 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 RPS26P11Q5JNZ5 115 aaPredicted RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 PCID2Q5JVF3 399 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 FNDC7Q5VTL7 733 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 BICRALQ6AI39 1079 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 MRNIPQ6NTE8 343 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 AADACL2Q6P093 401 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 ZNF474Q6S9Z5 364 aaPredicted RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 C12orf54Q6X4T0 127 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 IL17RELQ6ZVW7 336 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 CPNE9Q8IYJ1 553 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 ANKRD53Q8N9V6 530 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 CD200R1Q8TD46 325 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 ZMYND19Q96E35 227 aaPredicted RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 ART5Q96L15 291 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 RILPQ96NA2 401 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 GAL3ST4Q96RP7 486 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 BPIFA3Q9BQP9 254 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 TMEM204Q9BSN7 226 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 HAUS8Q9BT25 410 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 NPLQ9BXD5 320 aaPredicted RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 OPN3Q9H1Y3 402 aaPredicted RBP7.45□□□□□ -1.22
CD44-232ENST00000531118 ADAMTS6Q9UKP5 1117 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 MAPRE3Q9UPY8 281 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 PDE10AQ9Y233 779 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 DTX4Q9Y2E6 619 aa7.45□□□□□ -1.22
CD44-232ENST00000531118 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
CD44-232ENST00000531118 IGHV4-30-2A0A087WSY4 118 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 SMTNL1A8MU46 457 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 C16orf97H3BN30 126 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 EIF3FO00303 357 aaPredicted RBP7.44□□□□□ -1.22
CD44-232ENST00000531118 PFDN6O15212 129 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 HCRTR2O43614 444 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 ETHE1O95571 254 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 ACTL6AO96019 429 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 THBDP07204 575 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 SERPINA6P08185 405 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 SOD3P08294 240 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 NPPBP16860 134 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 EGR1P18146 543 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 PAMP19021 973 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 SAT1P21673 171 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 FDFT1P37268 417 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 MASP1P48740 699 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 NAGLUP54802 743 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 EEF1A1P68104 462 aaKnown RBP7.44□□□□□ -1.22
CD44-232ENST00000531118 BTN3A2P78410 334 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 STX4Q12846 297 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 SP140Q13342 867 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 RPS6KA2Q15349 733 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 TOMM20Q15388 145 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 EEF1A1P5Q5VTE0 462 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 SCIMPQ6UWF3 145 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 CYHR1Q6ZMK1 362 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 MILR1Q7Z6M3 343 aa7.44□□□□□ -1.22
CD44-232ENST00000531118 GRAMD2AQ8IUY3 354 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms