RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 SPRED3Q2MJR0 410 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 PLEKHN1Q494U1 663 aaPredicted RBP11.05□□□□□ -0.64
LTBP3-219ENST00000530990 GALNTL6Q49A17 601 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 PRR30Q53SZ7 412 aaPredicted RBP11.05□□□□□ -0.64
LTBP3-219ENST00000530990 NOXRED1Q6NXP6 359 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 RPS19BP1Q86WX3 136 aaKnown RBP11.05□□□□□ -0.64
LTBP3-219ENST00000530990 LGI4Q8N135 537 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 OR1N1Q8NGS0 311 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 FAM76AQ8TAV0 307 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 HAS2Q92819 552 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 CNRIP1Q96F85 164 aaPredicted RBP11.05□□□□□ -0.64
LTBP3-219ENST00000530990 RBM18Q96H35 190 aaKnown RBP11.05□□□□□ -0.64
LTBP3-219ENST00000530990 FBXL20Q96IG2 436 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 C3orf30Q96M34 536 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 CNPPD1Q9BV87 410 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 RNF32Q9H0A6 362 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 MYNNQ9NPC7 610 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 ANKRD10Q9NXR5 420 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 UTS2RQ9UKP6 389 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 ERVK-19Q9WJR5 959 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 RAP2CQ9Y3L5 183 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 SHANK1Q9Y566 2161 aa11.05□□□□□ -0.64
LTBP3-219ENST00000530990 ATP6AP2A0A1C7CYW4 349 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 TMEM200CA6NKL6 621 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 PYCARD-AS1I3L0S3 204 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 J3QKU1 62 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 DYRK3O43781 588 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 ATP6AP2O75787 350 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 CLPSP04118 112 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 IGKV3-11P04433 115 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 CT62P0C5K7 136 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 DRD2P14416 443 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 PORP16435 677 aaPredicted RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 SDC1P18827 310 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 TACR1P25103 407 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 FEN1P39748 380 aaKnown RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 TNFSF10P50591 281 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 XKP51811 444 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 MLLT10P55197 1068 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 MLF1P58340 268 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 STX3Q13277 289 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 TUBA3CQ13748 450 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 ZNF169Q14929 603 aaPredicted RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 HEPACAMQ14CZ8 416 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 TLR1Q15399 786 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 RFTN2Q52LD8 501 aaPredicted RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 FAM71E1Q6IPT2 247 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 TUBA3EQ6PEY2 450 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 HSDL2Q6YN16 418 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 C16orf47Q6ZP98 133 aaPredicted RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 GALNT12Q8IXK2 581 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 ARMC10Q8N2F6 343 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 RIT1Q92963 219 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 EXOSC8Q96B26 276 aaKnown RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 C19orf60Q96EN9 201 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 SENP5Q96HI0 755 aaPredicted RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 METTL2AQ96IZ6 378 aaKnown RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 EGLN2Q96KS0 407 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 ART5Q96L15 291 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 CCT7Q99832 543 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 LIN28AQ9H9Z2 209 aaKnown RBP11.04□□□□□ -0.64
LTBP3-219ENST00000530990 CXorf21Q9HAI6 301 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 SLAMF7Q9NQ25 335 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 ABI3Q9P2A4 366 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 COPS7AQ9UBW8 275 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 HAO1Q9UJM8 370 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
LTBP3-219ENST00000530990 UQCRHLA0A096LP55 91 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 TTLL8A6PVC2 850 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 FCHO1O14526 889 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 PEX11AO75192 247 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ITGA10O75578 1167 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ZFAND5O76080 213 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 SNUPNO95149 360 aaKnown RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ZIC2O95409 532 aaPredicted RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ATP1B1P05026 303 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 CSNK2A2P19784 350 aaPredicted RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 DDCP20711 480 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 NT5EP21589 574 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 SSTR4P31391 388 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 GALNSP34059 522 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 CD96P40200 585 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 HK2P52789 917 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 RNF4P78317 190 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 C2orf80Q0P641 193 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 LTB4RQ15722 352 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 ZNF468Q5VIY5 522 aaPredicted RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 IKBIPQ70UQ0 350 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 LRRC25Q8N386 305 aaPredicted RBP11.03□□□□□ -0.64
LTBP3-219ENST00000530990 GOLGA6L1Q8N7Z2 621 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 MDS2Q8NDY4 140 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 OR8K3Q8NH51 312 aa11.03□□□□□ -0.64
LTBP3-219ENST00000530990 CLHC1Q8NHS4 586 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms