RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TRAM2Q15035 370 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PTGES3Q15185 160 aaKnown RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 RNF212Q495C1 297 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SLC25A30Q5SVS4 291 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 C10orf91Q5T1B1 145 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SLC30A6Q6NXT4 461 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SCIMPQ6UWF3 145 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 GPR142Q7Z601 462 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 ARHGAP12Q8IWW6 846 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 ARMC10Q8N2F6 343 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 TBC1D19Q8N5T2 526 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 LINC01465Q8N7H1 131 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 OR6P1Q8NGX9 317 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 CHFRQ96EP1 664 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM68Q96MH6 324 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 GSDMCQ9BYG8 508 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 FAM126AQ9BYI3 521 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 DBNDD1Q9H9R9 158 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 RNF146Q9NTX7 359 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 COMMD3Q9UBI1 195 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 CBLCQ9ULV8 474 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 RPL36Q9Y3U8 105 aaKnown RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PLXNA3P51805 1871 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 LOC390937A0A1W2PQ73 354 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PPEF2O14830 753 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 ITGA10O75578 1167 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 RP2O75695 350 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SMPD1P17405 629 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 NFYAP23511 347 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SLC6A4P31645 630 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 HMGA2P52926 109 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 MC2RQ01718 297 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 GK2Q14410 553 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PCBP2Q15366 365 aaKnown RBP eCLIP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 OCLNQ16625 522 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SLC36A2Q495M3 483 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SYTL3Q4VX76 610 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 LIPKQ5VXJ0 399 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 AFMIDQ63HM1 303 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 MSANTD2Q6P1R3 559 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 IL27RAQ6UWB1 636 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PTCHD4Q6ZW05 846 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 PTOV1Q86YD1 416 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SYNPOQ8N3V7 929 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 FAM71CQ8NEG0 241 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 OR56B4Q8NH76 319 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 FAM151AQ8WW52 585 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 NDRG1Q92597 394 aaKnown RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 CNOT9Q92600 299 aaKnown RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 BARX1Q9HBU1 254 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 SLAMF7Q9NQ25 335 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 EXOSC3Q9NQT5 275 aaKnown RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 MED11Q9P086 117 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 GALPQ9UBC7 116 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 MIOXQ9UGB7 285 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 ZNF214Q9UL59 606 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-214ENST00000530886 CA5BQ9Y2D0 317 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 CHST2Q9Y4C5 530 aa7.74□□□□□ -1.17
CSDE1-214ENST00000530886 C5orf52A6NGY3 159 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 RGS11O94810 467 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 TFPIP10646 304 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 CPN1P15169 458 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 LAG3P18627 525 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ATP5A1P25705 553 aaKnown RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PSMA3P25788 255 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 S100A11P31949 105 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PLIN5Q00G26 463 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SERTAD2Q14140 314 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PTPRRQ15256 657 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SV2CQ496J9 727 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 USP39Q53GS9 565 aaKnown RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SPOUT1Q5T280 376 aaKnown RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 AVPI1Q5T686 147 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ZC3H14Q6PJT7 736 aaKnown RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PAQR9Q6ZVX9 377 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ACOT1Q86TX2 421 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 LRRC28Q86X40 367 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 ZBTB8OSQ8IWT0 167 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 CRYBG2Q8N1P7 616 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 MS4A3Q96HJ5 214 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 DMRTA2Q96SC8 542 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 NIPSNAP1Q9BPW8 284 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 MROH8Q9H579 483 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PDGFCQ9NRA1 345 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 THSD1Q9NS62 852 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 TMEM184CQ9NVA4 438 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PIPOXQ9P0Z9 390 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 KIF26AQ9ULI4 1882 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SNX11Q9Y5W9 270 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 RGS14O43566 566 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 OR1I1O60431 355 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 OR2A4O95047 310 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 STAG3L1P0CL83 205 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SPP1P10451 314 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 PVALBP20472 110 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-214ENST00000530886 SELENOPP49908 381 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 HTR6P50406 440 aa7.73□□□□□ -1.17
CSDE1-214ENST00000530886 CTBP2P56545 445 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms