RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 WDR34Q96EX3 536 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 SLC35A5Q9BS91 424 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 NARFLQ9H6Q4 476 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 RPS6KA6Q9UK32 745 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 ZFR2Q9UPR6 939 aaKnown RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 RNF6Q9Y252 685 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 MAP4K5Q9Y4K4 846 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 F5P12259 2224 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 A0A0G2JN53 185 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 C1orf226A1L170 272 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 MEIOCA2RUB1 952 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 ANKDD1BA6NHY2 528 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 DSCR3O14972 297 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 SSX4O60224 188 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 KLHL18O94889 574 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 FABP3P05413 133 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 FURINP09958 794 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 DBTP11182 482 aaKnown RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 TNFRSF1BP20333 461 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 CTSKP43235 329 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 MPEG1Q2M385 716 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 OR2T5Q6IEZ7 315 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 CCDC190Q86UF4 302 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 KRT78Q8N1N4 520 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 DEPDC4Q8N2C3 294 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 OR2T29Q8NH02 315 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 SETD7Q8WTS6 366 aaKnown RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 POP5Q969H6 163 aaKnown RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 METTL2AQ96IZ6 378 aaKnown RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 C12orf66Q96MD2 445 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 TRMT61BQ9BVS5 477 aaKnown RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 RSPH9Q9H1X1 276 aaPredicted RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 RIBC2Q9H4K1 309 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 MIEF1Q9NQG6 463 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 TMEFF2Q9UIK5 374 aaPredicted RBP10.99□□□□□ -0.65
USP35-207ENST00000530546 TBC1D24Q9ULP9 559 aa10.99□□□□□ -0.65
USP35-207ENST00000530546 C21orf58P58505 322 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 HYAL1Q12794 435 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 EIF2B5Q13144 721 aaKnown RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 SGCGQ13326 291 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 ATAT1Q5SQI0 421 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 FAM205BPQ63HN1 556 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 METRNLQ641Q3 311 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 LCTLQ6UWM7 567 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 NUDT18Q6ZVK8 323 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 FAM124AQ86V42 546 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SYNPOQ8N3V7 929 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 FBXL6Q8N531 539 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 OR5K2Q8NHB8 316 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SNAPC3Q92966 411 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 OR2A14Q96R47 310 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SLC28A3Q9HAS3 691 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 IL1RAPQ9NPH3 570 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 C5AR2Q9P296 337 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SNX8Q9Y5X2 465 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 MUC22E2RYF6 1773 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 KIF26AQ9ULI4 1882 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 PRAMEF33A0A0G2JMD5 474 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 A0A1W2PQU0 124 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 A8MV72 311 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 RNASET2O00584 256 aaKnown RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 AP3D1O14617 1153 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SLC31A1O15431 190 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 CHI3L1P36222 383 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 CSNK2BP67870 215 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 KRT33BQ14525 404 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 CYP27C1Q4G0S4 372 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 EIF3MQ7L2H7 374 aaKnown RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 GALNT6Q8NCL4 622 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SPPL2AQ8TCT8 520 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 UBE2E3Q969T4 207 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SIGLEC11Q96RL6 698 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 TRAF4Q9BUZ4 470 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 BHLHE41Q9C0J9 482 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 PDP1Q9P0J1 537 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 AASSQ9UDR5 926 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 ZNF282Q9UDV7 671 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 ATP6V1HQ9UI12 483 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 SAMHD1Q9Y3Z3 626 aaKnown RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 BET1O15155 118 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 FAM20BO75063 409 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 RPLP0P05388 317 aaKnown RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 C5AR1P21730 350 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 IGFBP5P24593 272 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 PTX3P26022 381 aaPredicted RBP10.98□□□□□ -0.65
USP35-207ENST00000530546 SOX6P35712 828 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 RPA4Q13156 261 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 FAM71E1Q6IPT2 247 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 ANKRD54Q6NXT1 300 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 FAM122CQ6P4D5 195 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 CBLL1Q75N03 491 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 FAM129CQ86XR2 697 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 TCTE3Q8IZS6 198 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 ANKRD53Q8N9V6 530 aa10.98□□□□□ -0.65
USP35-207ENST00000530546 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.98□□□□□ -0.65
USP35-207ENST00000530546 INSM2Q96T92 566 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms